RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 MGARPQ8TDB4 240 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 LRRC15Q8TF66 581 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
TRERF1-201ENST00000340840 MYH3P11055 1940 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 NPEPPSP55786 919 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 DRAP1Q14919 205 aaPredicted RBP10.2□□□□□ -0.78
TRERF1-201ENST00000340840 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.2□□□□□ -0.78
TRERF1-201ENST00000340840 CNKSR1Q969H4 720 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 FAM20AQ96MK3 541 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 ELAC2Q9BQ52 826 aaKnown RBP10.2□□□□□ -0.78
TRERF1-201ENST00000340840 CD248Q9HCU0 757 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 PIM2Q9P1W9 311 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 BAZ2AQ9UIF9 1905 aaKnown RBP10.2□□□□□ -0.78
TRERF1-201ENST00000340840 TRAPPC3O43617 180 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 LRRN2O75325 713 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 TMEM253P0C7T8 217 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 MESDQ14696 234 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 TTBK2Q6IQ55 1244 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 CYB5D1Q6P9G0 228 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 OGFOD1Q8N543 542 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 SCFD2Q8WU76 684 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 TBC1D31Q96DN5 1066 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 ERP44Q9BS26 406 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 RTFDC1Q9BY42 306 aaPredicted RBP10.2□□□□□ -0.78
TRERF1-201ENST00000340840 CARD9Q9H257 536 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 GANQ9H2C0 597 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 PARVGQ9HBI0 331 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 DDX20Q9UHI6 824 aaKnown RBP10.2□□□□□ -0.78
TRERF1-201ENST00000340840 PNMA2Q9UL42 364 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 COL1A1P02452 1464 aaPredicted RBP10.19□□□□□ -0.78
TRERF1-201ENST00000340840 ROBO3Q96MS0 1386 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 EVI5O60447 810 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 CHRNA3P32297 505 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 SLCO1A2P46721 670 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 PDE6CP51160 858 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 ATP11AP98196 1134 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 ZNF211Q13398 564 aaPredicted RBP10.19□□□□□ -0.78
TRERF1-201ENST00000340840 SETDB1Q15047 1291 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 QRICH1Q2TAL8 776 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 KIAA1755Q5JYT7 1200 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 CCDC174Q6PII3 467 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 SLC16A10Q8TF71 515 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 REEP2Q9BRK0 252 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 GRIN3BO60391 1043 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 NOL4O94818 638 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 GAS8O95995 478 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 YY1P25490 414 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 ODR4Q5SWX8 454 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 INTS8Q75QN2 995 aaKnown RBP10.19□□□□□ -0.78
TRERF1-201ENST00000340840 TMC3Q7Z5M5 1100 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 USP37Q86T82 979 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 ANKRD42Q8N9B4 389 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 LINC00116Q8NCU8 138 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 SLC35G2Q8TBE7 412 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 PAIP2Q9BPZ3 127 aaKnown RBP10.19□□□□□ -0.78
TRERF1-201ENST00000340840 AZI2Q9H6S1 392 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 CTDP1Q9Y5B0 961 aaPredicted RBP10.19□□□□□ -0.78
TRERF1-201ENST00000340840 MYO5AQ9Y4I1 1855 aaKnown RBP10.19□□□□□ -0.78
TRERF1-201ENST00000340840 STRCQ7RTU9 1775 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 F8VZ95 297 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 ITGA4P13612 1032 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 MARSP56192 900 aaKnown RBP10.19□□□□□ -0.78
TRERF1-201ENST00000340840 TRADDQ15628 312 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 ZCWPW2Q504Y3 356 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 FAM133BQ5BKY9 247 aaKnown RBP10.19□□□□□ -0.78
TRERF1-201ENST00000340840 FBF1Q8TES7 1133 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 MAIP1Q8WWC4 291 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 STK33Q9BYT3 514 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 CD2APQ9Y5K6 639 aa10.19□□□□□ -0.78
TRERF1-201ENST00000340840 GAS7O60861 476 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 AGTP01019 485 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 CHN1P15882 459 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 ELF1P32519 619 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 STX2P32856 288 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 SLC35G1Q2M3R5 365 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 PTF1AQ7RTS3 328 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 CLEC10AQ8IUN9 316 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 BEGAINQ9BUH8 593 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 TRAF3IP3Q9Y228 551 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.18□□□□□ -0.78
TRERF1-201ENST00000340840 PHLPP1O60346 1717 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 ANKRD62A6NC57 917 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 CFAP73A6NFT4 308 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 CCT8L1PA6NM43 557 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 MYBP10242 640 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 NEFHP12036 1026 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 RPA1P27694 616 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 PRKCIP41743 596 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 TBC1D1Q86TI0 1168 aaPredicted RBP10.18□□□□□ -0.78
TRERF1-201ENST00000340840 GBP7Q8N8V2 638 aaPredicted RBP10.18□□□□□ -0.78
TRERF1-201ENST00000340840 CCHCR1Q8TD31 782 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 KIFAP3Q92845 792 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 TEKT1Q969V4 418 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 PABPC3Q9H361 631 aaKnown RBP10.18□□□□□ -0.78
TRERF1-201ENST00000340840 UBR2Q8IWV8 1755 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 TBX3O15119 743 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 PPIP5K2O43314 1243 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 ECEL1O95672 775 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 ALDH1B1P30837 517 aa10.18□□□□□ -0.78
TRERF1-201ENST00000340840 SCTRP47872 440 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms