RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TMEM40Q8WWA1 233 aa14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 ATXN2LQ8WWM7 1075 aaKnown RBP14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 SLC7A3Q8WY07 619 aa14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 ZNF689Q96CS4 500 aaPredicted RBP14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 CEP89Q96ST8 783 aa14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 LXNQ9BS40 222 aa14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 ADAMTS10Q9H324 1103 aa14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 TMX1Q9H3N1 280 aa14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 ZSWIM4Q9H7M6 989 aa14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 SUGCTQ9HAC7 445 aa14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 RGS18Q9NS28 235 aa14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 LRFN2Q9ULH4 789 aa14.94□□□□□ -0.02
SIRPB3P-201ENST00000340424 C5orf67F2Z3F1 127 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 RFXAPO00287 272 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 RB1P06400 928 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 SARSP49591 514 aaKnown RBP14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 FOSBP53539 338 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 GNL2Q13823 731 aaKnown RBP14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 PTPROQ16827 1216 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 TMEM266Q2M3C6 531 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 EPC2Q52LR7 807 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 NCAPH2Q6IBW4 605 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 SLC24A5Q71RS6 500 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 RTN4RL1Q86UN2 441 aaPredicted RBP14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 ZNF410Q86VK4 478 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 FAM228AQ86W67 206 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 CMTR2Q8IYT2 770 aaKnown RBP14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 GDPD5Q8WTR4 605 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 CLP1Q92989 425 aaKnown RBP14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 TBC1D32Q96NH3 1257 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 SCLT1Q96NL6 688 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 MTMR9Q96QG7 549 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 C17orf80Q9BSJ5 609 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 TTC12Q9H892 705 aaPredicted RBP14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 CDHR5Q9HBB8 845 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 CYP26B1Q9NR63 512 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 THEGQ9P2T0 379 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 MTUS1Q9ULD2 1270 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 REV3LO60673 3130 aa14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 SPTBN5Q9NRC6 3674 aaKnown RBP14.93□□□□□ -0.02
SIRPB3P-201ENST00000340424 H3BNC9 293 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 LYPLA2O95372 231 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 DARSP14868 501 aaKnown RBP14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 YWHABP31946 246 aaKnown RBP14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 BTG3Q14201 252 aaPredicted RBP14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 CCDC85BQ15834 202 aaPredicted RBP14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 NOSTRINQ8IVI9 506 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 TMEM192Q8IY95 271 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 MICALL1Q8N3F8 863 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 NLRP7Q8WX94 980 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 PPM1EQ8WY54 764 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 SYMPKQ92797 1274 aaKnown RBP14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 CEP170P1Q96L14 293 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 ADAM2Q99965 735 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 C11orf84Q9BUA3 381 aaPredicted RBP14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 PLVAPQ9BX97 442 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 GCOM2Q9BZD3 368 aaPredicted RBP14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 INO80BQ9C086 356 aaPredicted RBP14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 ELAC1Q9H777 363 aaKnown RBP14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 NOL7Q9UMY1 257 aaKnown RBP14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 COG5Q9UP83 839 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 PCDHB7Q9Y5E2 793 aa14.92□□□□□ -0.02
SIRPB3P-201ENST00000340424 NLRC5Q86WI3 1866 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 C9IYK1 514 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 HOXA2O43364 376 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 ZSCAN20P17040 1043 aaPredicted RBP14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 SFPQP23246 707 aaKnown RBP eCLIP14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 TXKP42681 527 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 POLGP54098 1239 aaPredicted RBP14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 GUCY1B3Q02153 619 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 AAK1Q2M2I8 961 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 NAALADL2Q58DX5 795 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 SPRED2Q7Z698 418 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 RSPH1Q8WYR4 309 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 MRPL38Q96DV4 380 aaKnown RBP14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 PPP1R16BQ96T49 567 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 HSD17B14Q9BPX1 270 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 LMAN2LQ9H0V9 348 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 DHX33Q9H6R0 707 aaKnown RBP14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 TMEM161AQ9NX61 479 aa14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 SUCLA2Q9P2R7 463 aaPredicted RBP14.91□□□□□ -0.02
SIRPB3P-201ENST00000340424 TMEM150BA6NC51 233 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 MGEA5O60502 916 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 SLITRK3O94933 977 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 U2AF2P26368 475 aaKnown RBP eCLIP14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 MCM7P33993 719 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 CTNNB1P35222 781 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 BMPR1AP36894 532 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 PSEN1P49768 467 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 FAM189BP81408 668 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 MRPS5P82675 430 aaKnown RBP14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 DSC3Q14574 896 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 TIGD5Q53EQ6 642 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 TJAP1Q5JTD0 557 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 PLA2G4FQ68DD2 849 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 TCP11Q8WWU5 503 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 PSPC1Q8WXF1 523 aaKnown RBP14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 DYDC2Q96IM9 177 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 TMX3Q96JJ7 454 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 EIF2AK1Q9BQI3 630 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms