RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 TRIM49BA6NDI0 452 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 MYADML2A6NDP7 307 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 EIF3DO15371 548 aaKnown RBP eCLIP8.65□□□□□ -1.02
TMC1-202ENST00000340019 AP5Z1O43299 807 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 ADAMTS4O75173 837 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 ZNF18P17022 549 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 CCNE1P24864 410 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 ARL2P36404 184 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 ZCWPW2Q504Y3 356 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 ZNF484Q5JVG2 852 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 FAM178BQ8IXR5 827 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 BSNDQ8WZ55 320 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 KCTD10Q9H3F6 313 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 ST6GALNAC4Q9H4F1 302 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 FANCLQ9NW38 375 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 NFE2L3Q9Y4A8 694 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 TRIM17Q9Y577 477 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 EVPLQ92817 2033 aa8.65□□□□□ -1.02
TMC1-202ENST00000340019 HAS3O00219 553 aa8.65□□□□□ -1.03
TMC1-202ENST00000340019 RARBP10826 455 aa8.65□□□□□ -1.03
TMC1-202ENST00000340019 INSRRP14616 1297 aa8.65□□□□□ -1.03
TMC1-202ENST00000340019 CNGA1P29973 690 aa8.65□□□□□ -1.03
TMC1-202ENST00000340019 NMT1P30419 496 aaKnown RBP8.65□□□□□ -1.03
TMC1-202ENST00000340019 NCKAP1LP55160 1127 aa8.65□□□□□ -1.03
TMC1-202ENST00000340019 BEX3Q00994 111 aa8.65□□□□□ -1.03
TMC1-202ENST00000340019 ANKRD40Q6AI12 368 aa8.65□□□□□ -1.03
TMC1-202ENST00000340019 EXOC8Q8IYI6 725 aa8.65□□□□□ -1.03
TMC1-202ENST00000340019 SPIRE2Q8WWL2 714 aa8.65□□□□□ -1.03
TMC1-202ENST00000340019 KCNN1Q92952 543 aa8.65□□□□□ -1.03
TMC1-202ENST00000340019 DUSP9Q99956 384 aaKnown RBP8.65□□□□□ -1.03
TMC1-202ENST00000340019 SIP14410 1827 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 SCN10AQ9Y5Y9 1956 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 BICDL2A1A5D9 508 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 GAS2O43903 313 aaKnown RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 GCNT3O95395 438 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 INHAP05111 366 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 PEX3P56589 373 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 PURAQ00577 322 aaKnown RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 TBC1D8BQ0IIM8 1120 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 MKRN4PQ13434 485 aaPredicted RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 BRDTQ58F21 947 aaPredicted RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 POLR3FQ9H1D9 316 aaPredicted RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 PTCH2Q9Y6C5 1203 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 UBE4BO95155 1302 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 PRPF6O94906 941 aaKnown RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 KIF20AO95235 890 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 C22orf31O95567 290 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 C6orf222P0C671 652 aaPredicted RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 GRK4P32298 578 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 NPTX2P47972 431 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 GTF2BQ00403 316 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 LRRC63Q05C16 580 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 KCNA1Q09470 495 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 DMP1Q13316 513 aaPredicted RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 DRP2Q13474 957 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 KNOP1Q1ED39 458 aaKnown RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 ZC2HC1CQ53FD0 456 aaPredicted RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 CDKAL1Q5VV42 579 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 SARM1Q6SZW1 724 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 LINC01465Q8N7H1 131 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 SLC17A8Q8NDX2 589 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 KLHDC9Q8NEP7 349 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 TRAPPC12Q8WVT3 735 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 TMEM143Q96AN5 459 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 SAMSN1Q9NSI8 373 aaKnown RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 DDX20Q9UHI6 824 aaKnown RBP8.64□□□□□ -1.03
TMC1-202ENST00000340019 ZMYM2Q9UBW7 1377 aa8.64□□□□□ -1.03
TMC1-202ENST00000340019 KPNA6O60684 536 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 PGK1P00558 417 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 GLRA2P23416 452 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 ALCAMQ13740 583 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 MARCH8Q5T0T0 291 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 CCSAPQ6IQ19 270 aaPredicted RBP8.63□□□□□ -1.03
TMC1-202ENST00000340019 TMEM161BQ8NDZ6 487 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 ASAP3Q8TDY4 903 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 JPH2Q9BR39 696 aaPredicted RBP8.63□□□□□ -1.03
TMC1-202ENST00000340019 XPNPEP3Q9NQH7 507 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 PTPN22Q9Y2R2 807 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 PCDHB13Q9Y5F0 798 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 ADGRA3Q8IWK6 1321 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 K7ENM7 598 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 ATP1A3P13637 1013 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 CST5P28325 142 aaPredicted RBP8.63□□□□□ -1.03
TMC1-202ENST00000340019 MFSD10Q14728 455 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 KIAA0753Q2KHM9 967 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 GNASQ5JWF2 1037 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 IER5Q5VY09 327 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 HAUS6Q7Z4H7 955 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 NELFCDQ8IXH7 590 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 ARHGAP28Q9P2N2 729 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 KCNG1Q9UIX4 513 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 TRAF3IP3Q9Y228 551 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 DNAH12Q6ZR08 3092 aa8.63□□□□□ -1.03
TMC1-202ENST00000340019 SLC16A4O15374 487 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 MAGEB2O15479 319 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 TGFB1I1O43294 461 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 MYL3P08590 195 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 KLRC1P26715 233 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 NAMPTP43490 491 aa8.62□□□□□ -1.03
TMC1-202ENST00000340019 PSEN2P49810 448 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms