RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 GGT7Q9UJ14 662 aa13.66□□□□□ -0.22
USP47-202ENST00000339865 SMAPO00193 183 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 DPYSL4O14531 572 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 LINS1Q8NG48 757 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 RNF14Q9UBS8 474 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 CHMP2BQ9UQN3 213 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 E7EWF7 191 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 AP3B1O00203 1094 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 SENP1Q9P0U3 644 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 STK17AQ9UEE5 414 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 M0R2C6 588 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 RNF103O00237 685 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 SLC16A1P53985 500 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 TP53BP2Q13625 1128 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 LRRC14Q15048 493 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 RETREG2Q8NC44 543 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 GPT2Q8TD30 523 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 AIPL1Q9NZN9 384 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 ARFIP2P53365 341 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 STXBP2Q15833 593 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 ARL13BQ3SXY8 428 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 YAF2Q8IY57 180 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 ATXN7L3BQ96GX2 97 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 CCT7Q99832 543 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 MYH6P13533 1939 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 GTPBP6O43824 516 aaPredicted RBP13.65□□□□□ -0.22
USP47-202ENST00000339865 CD58P19256 250 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 PWP1Q13610 501 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 INPP5AQ14642 412 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 BNIPLQ7Z465 357 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 CYFIP2Q96F07 1278 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 FAM89AQ96GI7 184 aa13.65□□□□□ -0.22
USP47-202ENST00000339865 FGGP02679 453 aa13.65□□□□□ -0.23
USP47-202ENST00000339865 EMBQ6PCB8 327 aa13.65□□□□□ -0.23
USP47-202ENST00000339865 XAGE2Q96GT9 111 aa13.65□□□□□ -0.23
USP47-202ENST00000339865 CACNA2D2Q9NY47 1150 aa13.65□□□□□ -0.23
USP47-202ENST00000339865 PCDHA5Q9Y5H7 936 aa13.65□□□□□ -0.23
USP47-202ENST00000339865 ITGA6P23229 1130 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 ATAD3BQ5T9A4 648 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 MICU2Q8IYU8 434 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 UXS1Q8NBZ7 420 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 CTIFO43310 598 aaKnown RBP13.64□□□□□ -0.23
USP47-202ENST00000339865 KRT38O76015 456 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 SERPING1P05155 500 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 SERPINB4P48594 390 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 PPP2R2AP63151 447 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 FAM26FQ5R3K3 315 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 OR8H2Q8N162 312 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 NDUFAF2Q8N183 169 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 PLEKHA8Q96JA3 519 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 PCIF1Q9H4Z3 704 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 TRIM39Q9HCM9 518 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 CLIC4Q9Y696 253 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 NEMP1O14524 444 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 PSMA2P25787 234 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 TEX2Q8IWB9 1127 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 CALR3Q96L12 384 aaKnown RBP13.64□□□□□ -0.23
USP47-202ENST00000339865 MYO1DO94832 1006 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 MYL1P05976 194 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 SIX6OS1Q8N1H7 587 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 SCG3Q8WXD2 468 aaKnown RBP13.64□□□□□ -0.23
USP47-202ENST00000339865 FAM96AQ9H5X1 160 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 POLA2Q14181 598 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 MAPKAPK5Q8IW41 473 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 GSPT2Q8IYD1 628 aaKnown RBP13.64□□□□□ -0.23
USP47-202ENST00000339865 ZNF532Q9HCE3 1301 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 XPOTO43592 962 aaKnown RBP13.64□□□□□ -0.23
USP47-202ENST00000339865 CDH2P19022 906 aaPredicted RBP13.64□□□□□ -0.23
USP47-202ENST00000339865 FASTKD1Q53R41 847 aaKnown RBP13.64□□□□□ -0.23
USP47-202ENST00000339865 TNNI3KQ59H18 835 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 TADA1Q96BN2 335 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 ZNF594Q96JF6 807 aaPredicted RBP13.64□□□□□ -0.23
USP47-202ENST00000339865 CCDC87Q9NVE4 849 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 MRPL39Q9NYK5 338 aaKnown RBP13.64□□□□□ -0.23
USP47-202ENST00000339865 FPGT-TNNI3KV9GXZ4 949 aa13.64□□□□□ -0.23
USP47-202ENST00000339865 TCP11X1B4DZS4 312 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 INO80B-WBP1J3KQ70 363 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 SNPHO15079 494 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 SFR1Q86XK3 245 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 ELMOD1Q8N336 334 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 DDHD1Q8NEL9 900 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 INO80BQ9C086 356 aaPredicted RBP13.63□□□□□ -0.23
USP47-202ENST00000339865 ENO3P13929 434 aaPredicted RBP13.63□□□□□ -0.23
USP47-202ENST00000339865 SOX6P35712 828 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 THEMIS2Q5TEJ8 643 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 C19orf60Q96EN9 201 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 BRIP1Q9BX63 1249 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 TEKT3Q9BXF9 490 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 CCDC22O60826 627 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 ALAS1P13196 640 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 PLOD1Q02809 727 aaPredicted RBP13.63□□□□□ -0.23
USP47-202ENST00000339865 EML4Q9HC35 981 aaKnown RBP13.63□□□□□ -0.23
USP47-202ENST00000339865 ATP8A2Q9NTI2 1148 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 ANGPT2O15123 496 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 MTRF1O75570 445 aaKnown RBP13.63□□□□□ -0.23
USP47-202ENST00000339865 PDE5AO76074 875 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 CENPPQ6IPU0 288 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 C16orf62Q7Z3J2 963 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 C11orf74Q86VG3 221 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms