RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 MAGEB2O15479 319 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 HOXA2O43364 376 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 SRGAP2BP0DMP2 458 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 CLCN3P51790 818 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 PRR16Q569H4 304 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 BMP8AQ7Z5Y6 402 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 MS4A3Q96HJ5 214 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 RPGRIP1Q96KN7 1286 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 FAM167AQ96KS9 214 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 MAP7D2Q96T17 732 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 TMEM117Q9H0C3 514 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 CWH43Q9H720 699 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 GABBR1Q9UBS5 961 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 PUF60Q9UHX1 559 aaKnown RBP17.69■□□□□ 0.42
LINC01116-202ENST00000339037 AKT3Q9Y243 479 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 LZTS1Q9Y250 596 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 WDR81Q562E7 1941 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 WDR64B1ANS9 1081 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 FSCN2O14926 492 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 ADAMTS3O15072 1205 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 ATF7P17544 494 aaPredicted RBP17.68■□□□□ 0.42
LINC01116-202ENST00000339037 TMOD1P28289 359 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 GNA11P29992 359 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 NLRP11P59045 1033 aaKnown RBP17.68■□□□□ 0.42
LINC01116-202ENST00000339037 APOBRQ0VD83 1088 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 DSC3Q14574 896 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 PLPP4Q5VZY2 271 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 ABI1Q8IZP0 508 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 SUSD6Q92537 303 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 MRPS27Q92552 414 aaKnown RBP17.68■□□□□ 0.42
LINC01116-202ENST00000339037 EVPLQ92817 2033 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 PBXIP1Q96AQ6 731 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 TCF25Q9BQ70 676 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 ENTPD7Q9NQZ7 604 aa17.68■□□□□ 0.42
LINC01116-202ENST00000339037 CDC45O75419 566 aa17.67■□□□□ 0.42
LINC01116-202ENST00000339037 ZSCAN20P17040 1043 aaPredicted RBP17.67■□□□□ 0.42
LINC01116-202ENST00000339037 PPM1AP35813 382 aa17.67■□□□□ 0.42
LINC01116-202ENST00000339037 ZXDAP98168 799 aa17.67■□□□□ 0.42
LINC01116-202ENST00000339037 PLCB3Q01970 1234 aa17.67■□□□□ 0.42
LINC01116-202ENST00000339037 PKN1Q16512 942 aa17.67■□□□□ 0.42
LINC01116-202ENST00000339037 EFCAB12Q6NXP0 572 aa17.67■□□□□ 0.42
LINC01116-202ENST00000339037 SUGP1Q8IWZ8 645 aaKnown RBP17.67■□□□□ 0.42
LINC01116-202ENST00000339037 ZNF710Q8N1W2 664 aa17.67■□□□□ 0.42
LINC01116-202ENST00000339037 LRRC43Q8N309 656 aa17.67■□□□□ 0.42
LINC01116-202ENST00000339037 BICD2Q8TD16 824 aa17.67■□□□□ 0.42
LINC01116-202ENST00000339037 VPS13AQ96RL7 3174 aa17.67■□□□□ 0.42
LINC01116-202ENST00000339037 MYO15AQ9UKN7 3530 aa17.67■□□□□ 0.42
LINC01116-202ENST00000339037 OATP04181 439 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 CPA1P15085 419 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 EIF4BP23588 611 aaKnown RBP17.66■□□□□ 0.42
LINC01116-202ENST00000339037 CIITAP33076 1130 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 KCNT2Q6UVM3 1135 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 TMEM184AQ6ZMB5 413 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 LRRC55Q6ZSA7 311 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 LRRC71Q8N4P6 559 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 LINC01465Q8N7H1 131 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 RASGRP4Q8TDF6 673 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 BRF1Q92994 677 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 LENG9Q96B70 501 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 ZNF558Q96NG5 402 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 SCLT1Q96NL6 688 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 CASD1Q96PB1 797 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 ADAMTS10Q9H324 1103 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 NGRNQ9NPE2 291 aaKnown RBP17.66■□□□□ 0.42
LINC01116-202ENST00000339037 DISC1Q9NRI5 854 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 NID2Q14112 1375 aa17.66■□□□□ 0.42
LINC01116-202ENST00000339037 ZFHX2Q9C0A1 2572 aaPredicted RBP17.65■□□□□ 0.42
LINC01116-202ENST00000339037 WDR87Q6ZQQ6 2873 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 PRPF3O43395 683 aaKnown RBP17.65■□□□□ 0.42
LINC01116-202ENST00000339037 PBX3P40426 434 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 TECP42680 631 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 AKAP17AQ02040 695 aaKnown RBP17.65■□□□□ 0.42
LINC01116-202ENST00000339037 PRKCEQ02156 737 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 KRT17Q04695 432 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 KCNC3Q14003 757 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 ANKRD54Q6NXT1 300 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 LLGL2Q6P1M3 1020 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 Q6ZUG5 572 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 ECHDC2Q86YB7 292 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 RNF169Q8NCN4 708 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 CCDC148Q8NFR7 591 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 PHKBQ93100 1093 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 JAKMIP1Q96N16 626 aaKnown RBP17.65■□□□□ 0.42
LINC01116-202ENST00000339037 RNF19AQ9NV58 838 aa17.65■□□□□ 0.42
LINC01116-202ENST00000339037 MYH9P35579 1960 aaKnown RBP17.65■□□□□ 0.42
LINC01116-202ENST00000339037 HIDE1A8MVS5 230 aa17.64■□□□□ 0.41
LINC01116-202ENST00000339037 ZNF862O60290 1169 aa17.64■□□□□ 0.41
LINC01116-202ENST00000339037 SIGLEC14Q08ET2 396 aa17.64■□□□□ 0.41
LINC01116-202ENST00000339037 TMC7Q7Z402 723 aa17.64■□□□□ 0.41
LINC01116-202ENST00000339037 FBXL6Q8N531 539 aa17.64■□□□□ 0.41
LINC01116-202ENST00000339037 ZNF668Q96K58 619 aaPredicted RBP17.64■□□□□ 0.41
LINC01116-202ENST00000339037 PRRX2Q99811 253 aa17.64■□□□□ 0.41
LINC01116-202ENST00000339037 S1PR5Q9H228 398 aa17.64■□□□□ 0.41
LINC01116-202ENST00000339037 NRBP2Q9NSY0 501 aa17.64■□□□□ 0.41
LINC01116-202ENST00000339037 SPG21Q9NZD8 308 aa17.64■□□□□ 0.41
LINC01116-202ENST00000339037 MSH4O15457 936 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 CHMP2AO43633 222 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 GAS7O60861 476 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 DARSP14868 501 aaKnown RBP17.63■□□□□ 0.41
LINC01116-202ENST00000339037 HOXB8P17481 243 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms