RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 KAT5Q92993 513 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 ACSF2Q96CM8 615 aaPredicted RBP8.91□□□□□ -0.98
HPS4-201ENST00000336873 LRRC45Q96CN5 670 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 ERGIC2Q96RQ1 377 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 TEKT3Q9BXF9 490 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 ZNF408Q9H9D4 720 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 SEPT9Q9UHD8 586 aaPredicted RBP8.91□□□□□ -0.98
HPS4-201ENST00000336873 FEZ2Q9UHY8 353 aaPredicted RBP8.91□□□□□ -0.98
HPS4-201ENST00000336873 COL1A1P02452 1464 aaPredicted RBP8.91□□□□□ -0.98
HPS4-201ENST00000336873 PHRF1Q9P1Y6 1649 aaKnown RBP8.91□□□□□ -0.98
HPS4-201ENST00000336873 HIP1RO75146 1068 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 PIAS1O75925 651 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 ADCY8P40145 1251 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 BAG6P46379 1132 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 SMTNP53814 917 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 SLC10A5Q5PT55 438 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 KLHDC7AQ5VTJ3 777 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 METTL13Q8N6R0 699 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 CHURC1Q8WUH1 139 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 RNPC3Q96LT9 517 aaKnown RBP8.91□□□□□ -0.98
HPS4-201ENST00000336873 MAGEF1Q9HAY2 307 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 SWAP70Q9UH65 585 aa8.91□□□□□ -0.98
HPS4-201ENST00000336873 ADRA2BP18089 450 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 MXI1P50539 228 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 PPP4CP60510 307 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 TMEM179Q6ZVK1 233 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 NLRX1Q86UT6 975 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 RPUSD2Q8IZ73 545 aaKnown RBP8.9□□□□□ -0.98
HPS4-201ENST00000336873 JPH2Q9BR39 696 aaPredicted RBP8.9□□□□□ -0.98
HPS4-201ENST00000336873 THAP2Q9H0W7 228 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 MAGED2Q9UNF1 606 aaPredicted RBP8.9□□□□□ -0.98
HPS4-201ENST00000336873 PLEKHG2Q9H7P9 1386 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 F5H423 210 aaPredicted RBP8.9□□□□□ -0.98
HPS4-201ENST00000336873 FOXN3O00409 490 aaPredicted RBP8.9□□□□□ -0.98
HPS4-201ENST00000336873 PPFIA4O75335 1185 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 GCFC2P16383 781 aaKnown RBP8.9□□□□□ -0.98
HPS4-201ENST00000336873 YY1P25490 414 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 EN1Q05925 392 aaPredicted RBP8.9□□□□□ -0.98
HPS4-201ENST00000336873 MICALCLQ6ZW33 695 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 ZNF365Q70YC5 407 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 CASKIN2Q8WXE0 1202 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 CNKSR1Q969H4 720 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 FMO2Q99518 471 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 CBWD1Q9BRT8 395 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 WDR11Q9BZH6 1224 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 MTRF1LQ9UGC7 380 aaKnown RBP8.9□□□□□ -0.98
HPS4-201ENST00000336873 RASAL2Q9UJF2 1139 aa8.9□□□□□ -0.98
HPS4-201ENST00000336873 DBR1Q9UK59 544 aaKnown RBP8.9□□□□□ -0.98
HPS4-201ENST00000336873 ANO9A1A5B4 782 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 PI4K2BG5E9Z4 385 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 MYO1FO00160 1098 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 PEX10O60683 326 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 ZBTB7AO95365 584 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 ACOT2P49753 483 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 GRM1Q13255 1194 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 PDIA5Q14554 519 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 DCUN1D2Q6PH85 259 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 FAM47EQ6ZV65 393 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 LDHDQ86WU2 507 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 COL23A1Q86Y22 540 aaPredicted RBP8.9□□□□□ -0.99
HPS4-201ENST00000336873 UBL4BQ8N7F7 174 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 SLC20A1Q8WUM9 679 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 RNF25Q96BH1 459 aaPredicted RBP8.9□□□□□ -0.99
HPS4-201ENST00000336873 FAM213AQ9BRX8 229 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 PRM3Q9NNZ6 103 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 MKRN1Q9UHC7 482 aaKnown RBP8.9□□□□□ -0.99
HPS4-201ENST00000336873 NAGPAQ9UK23 515 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 MTUS1Q9ULD2 1270 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 CNTNAP4Q9C0A0 1308 aa8.9□□□□□ -0.99
HPS4-201ENST00000336873 PON1P27169 355 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 DR1Q01658 176 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 MKRN3Q13064 507 aaKnown RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 GIT2Q14161 759 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 BSPRYQ5W0U4 402 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 APOBEC3HQ6NTF7 200 aaKnown RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 MSANTD4Q8NCY6 345 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 GIMAP7Q8NHV1 300 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 PPM1EQ8WY54 764 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 DHX38Q92620 1227 aaKnown RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 RMDN3Q96TC7 470 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 ELAC2Q9BQ52 826 aaKnown RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 NUCKS1Q9H1E3 243 aaKnown RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 RIOX1Q9H6W3 641 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 METTL14Q9HCE5 456 aaKnown RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 TOPORSQ9NS56 1045 aaPredicted RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 TAS2R14Q9NYV8 317 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 NXF1Q9UBU9 619 aaKnown RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 KCNG1Q9UIX4 513 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 MYH8P13535 1937 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 SRGAP2CP0DJJ0 459 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 NPR1P16066 1061 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 KRT15P19012 456 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 PSMD2Q13200 908 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 EAPPQ56P03 285 aaPredicted RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 B4GALNT4Q76KP1 1039 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 ARFGAP2Q8N6H7 521 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 CPA5Q8WXQ8 436 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 ATG4AQ8WYN0 398 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 NACC1Q96RE7 527 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 TAF1P21675 1872 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms