RNA–Protein interactions for RNA: ENST00000336840.10

PAX3-202, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-202ENST00000336840 BRDTQ58F21 947 aaPredicted RBP13.9□□□□□ -0.18
PAX3-202ENST00000336840 ZNF484Q5JVG2 852 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 CDKAL1Q5VV42 579 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 STXBP4Q6ZWJ1 553 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 DUSP9Q99956 384 aaKnown RBP13.9□□□□□ -0.18
PAX3-202ENST00000336840 UPF3AQ9H1J1 476 aaKnown RBP13.9□□□□□ -0.18
PAX3-202ENST00000336840 KCTD10Q9H3F6 313 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 RNPEPQ9H4A4 650 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 TUT1Q9H6E5 874 aaKnown RBP13.9□□□□□ -0.18
PAX3-202ENST00000336840 IGKV6-21A0A0C4DH24 114 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 HOXD13P35453 343 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 DEKP35659 375 aaKnown RBP13.9□□□□□ -0.18
PAX3-202ENST00000336840 GJA9P57773 515 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 TBC1D8BQ0IIM8 1120 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 DMP1Q13316 513 aaPredicted RBP13.9□□□□□ -0.18
PAX3-202ENST00000336840 ANKRD40Q6AI12 368 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 SPIRE2Q8WWL2 714 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 ANP32BQ92688 251 aaKnown RBP13.9□□□□□ -0.18
PAX3-202ENST00000336840 JPH2Q9BR39 696 aaPredicted RBP13.9□□□□□ -0.18
PAX3-202ENST00000336840 POLR3FQ9H1D9 316 aaPredicted RBP13.9□□□□□ -0.18
PAX3-202ENST00000336840 SAMSN1Q9NSI8 373 aaKnown RBP13.9□□□□□ -0.18
PAX3-202ENST00000336840 TSKSQ9UJT2 592 aa13.9□□□□□ -0.18
PAX3-202ENST00000336840 K7ENM7 598 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 PRPF6O94906 941 aaKnown RBP13.89□□□□□ -0.19
PAX3-202ENST00000336840 ATP1A3P13637 1013 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 CCND3P30281 292 aaPredicted RBP13.89□□□□□ -0.19
PAX3-202ENST00000336840 ARL2P36404 184 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 PEX3P56589 373 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 SOX10P56693 466 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 FSCN1Q16658 493 aaKnown RBP13.89□□□□□ -0.19
PAX3-202ENST00000336840 TPD52L1Q16890 204 aaPredicted RBP13.89□□□□□ -0.19
PAX3-202ENST00000336840 KNOP1Q1ED39 458 aaKnown RBP13.89□□□□□ -0.19
PAX3-202ENST00000336840 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 SLAIN1Q8ND83 568 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 NOC3LQ8WTT2 800 aaKnown RBP13.89□□□□□ -0.19
PAX3-202ENST00000336840 BSNDQ8WZ55 320 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 KCNN1Q92952 543 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 TSG101Q99816 390 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 NTPCRQ9BSD7 190 aaKnown RBP13.89□□□□□ -0.19
PAX3-202ENST00000336840 WBP1LQ9NX94 342 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 PCDHB13Q9Y5F0 798 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 ZMYM2Q9UBW7 1377 aa13.89□□□□□ -0.19
PAX3-202ENST00000336840 TRIP12Q14669 1992 aaPredicted RBP13.89□□□□□ -0.19
PAX3-202ENST00000336840 RARBP10826 455 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 INSRRP14616 1297 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 NELFCDQ8IXH7 590 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 KAT2BQ92831 832 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 THAP9Q9H5L6 903 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 KCNG1Q9UIX4 513 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 C22orf31O95567 290 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 ADCY5O95622 1261 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 CNGA1P29973 690 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 NPTX2P47972 431 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 SMTNP53814 917 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 IRX5P78411 483 aaPredicted RBP13.88□□□□□ -0.19
PAX3-202ENST00000336840 GTF2BQ00403 316 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 PLCB2Q00722 1185 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 ZC2HC1CQ53FD0 456 aaPredicted RBP13.88□□□□□ -0.19
PAX3-202ENST00000336840 ZC3H3Q8IXZ2 948 aaKnown RBP13.88□□□□□ -0.19
PAX3-202ENST00000336840 CSGALNACT2Q8N6G5 542 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 TCP11Q8WWU5 503 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 TMEM143Q96AN5 459 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 HVCN1Q96D96 273 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 IFT74Q96LB3 600 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 TYW1Q9NV66 732 aaKnown RBP13.88□□□□□ -0.19
PAX3-202ENST00000336840 TRAF3IP3Q9Y228 551 aa13.88□□□□□ -0.19
PAX3-202ENST00000336840 CEP350Q5VT06 3117 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 MYADML2A6NDP7 307 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 HAS3O00219 553 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 PDXKO00764 312 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 KPNA6O60684 536 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 GLRA2P23416 452 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 BEX3Q00994 111 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 KCNA1Q09470 495 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 PPP2R5AQ15172 486 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 EDRF1Q3B7T1 1238 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 IER5Q5VY09 327 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 HAUS6Q7Z4H7 955 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 DNAJC5GQ8N7S2 189 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 TMEM161BQ8NDZ6 487 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 ASAP3Q8TDY4 903 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 TRAPPC12Q8WVT3 735 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 PDLIM2Q96JY6 352 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 KMT5AQ9NQR1 393 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 TRIM17Q9Y577 477 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 ADGRA3Q8IWK6 1321 aa13.87□□□□□ -0.19
PAX3-202ENST00000336840 SLC16A4O15374 487 aa13.86□□□□□ -0.19
PAX3-202ENST00000336840 MAGEB2O15479 319 aa13.86□□□□□ -0.19
PAX3-202ENST00000336840 ADAMTS4O75173 837 aa13.86□□□□□ -0.19
PAX3-202ENST00000336840 MYL3P08590 195 aa13.86□□□□□ -0.19
PAX3-202ENST00000336840 C6orf222P0C671 652 aaPredicted RBP13.86□□□□□ -0.19
PAX3-202ENST00000336840 SCP2P22307 547 aa13.86□□□□□ -0.19
PAX3-202ENST00000336840 ABCD1P33897 745 aa13.86□□□□□ -0.19
PAX3-202ENST00000336840 NAMPTP43490 491 aa13.86□□□□□ -0.19
PAX3-202ENST00000336840 ZNF75DP51815 510 aa13.86□□□□□ -0.19
PAX3-202ENST00000336840 PURAQ00577 322 aaKnown RBP13.86□□□□□ -0.19
PAX3-202ENST00000336840 FANCCQ00597 558 aa13.86□□□□□ -0.19
PAX3-202ENST00000336840 SPAG1Q07617 926 aa13.86□□□□□ -0.19
PAX3-202ENST00000336840 PPFIA1Q13136 1202 aa13.86□□□□□ -0.19
PAX3-202ENST00000336840 MKRN4PQ13434 485 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms