RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 IBSPP21815 317 aaPredicted RBP16.69■□□□□ 0.26
KATNA1-201ENST00000335643 EIF4BP23588 611 aaKnown RBP16.69■□□□□ 0.26
KATNA1-201ENST00000335643 GATMP50440 423 aa16.69■□□□□ 0.26
KATNA1-201ENST00000335643 CUL4AQ13619 759 aa16.69■□□□□ 0.26
KATNA1-201ENST00000335643 CCDC85BQ15834 202 aaPredicted RBP16.69■□□□□ 0.26
KATNA1-201ENST00000335643 PPM1EQ8WY54 764 aa16.69■□□□□ 0.26
KATNA1-201ENST00000335643 TGS1Q96RS0 853 aaKnown RBP16.69■□□□□ 0.26
KATNA1-201ENST00000335643 ADAM2Q99965 735 aa16.69■□□□□ 0.26
KATNA1-201ENST00000335643 PRDM6Q9NQX0 595 aa16.69■□□□□ 0.26
KATNA1-201ENST00000335643 MTCH2Q9Y6C9 303 aa16.69■□□□□ 0.26
KATNA1-201ENST00000335643 ATG2AQ2TAZ0 1938 aa16.69■□□□□ 0.26
KATNA1-201ENST00000335643 FNDC1Q4ZHG4 1894 aaPredicted RBP16.69■□□□□ 0.26
KATNA1-201ENST00000335643 A0A087WZ62 844 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 DARSP14868 501 aaKnown RBP16.68■□□□□ 0.26
KATNA1-201ENST00000335643 TRAPPC10P48553 1259 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 DSC3Q14574 896 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 RHPN2Q8IUC4 686 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 NLRP7Q8WX94 980 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 TMEM143Q96AN5 459 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 FDXACB1Q9BRP7 624 aaPredicted RBP16.68■□□□□ 0.26
KATNA1-201ENST00000335643 XPNPEP1Q9NQW7 623 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 SUCLA2Q9P2R7 463 aaPredicted RBP16.68■□□□□ 0.26
KATNA1-201ENST00000335643 SMC3Q9UQE7 1217 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 ADGRA3Q8IWK6 1321 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 GPR182O15218 404 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 DKC1O60832 514 aaKnown RBP eCLIP16.68■□□□□ 0.26
KATNA1-201ENST00000335643 LYPLA2O95372 231 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 POLGP54098 1239 aaPredicted RBP16.68■□□□□ 0.26
KATNA1-201ENST00000335643 ORC2Q13416 577 aaPredicted RBP16.68■□□□□ 0.26
KATNA1-201ENST00000335643 XKR9Q5GH70 373 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 MCTP1Q6DN14 999 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 CATSPER3Q86XQ3 398 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 SLC17A8Q8NDX2 589 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 PIGOQ8TEQ8 1089 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 RGS18Q9NS28 235 aa16.68■□□□□ 0.26
KATNA1-201ENST00000335643 NOL7Q9UMY1 257 aaKnown RBP16.68■□□□□ 0.26
KATNA1-201ENST00000335643 C9IYK1 514 aa16.67■□□□□ 0.26
KATNA1-201ENST00000335643 SARSP49591 514 aaKnown RBP16.67■□□□□ 0.26
KATNA1-201ENST00000335643 PTGDRQ13258 359 aa16.67■□□□□ 0.26
KATNA1-201ENST00000335643 EMC2Q15006 297 aa16.67■□□□□ 0.26
KATNA1-201ENST00000335643 IL17AQ16552 155 aa16.67■□□□□ 0.26
KATNA1-201ENST00000335643 ECM1Q16610 540 aa16.67■□□□□ 0.26
KATNA1-201ENST00000335643 NPAS4Q8IUM7 802 aa16.67■□□□□ 0.26
KATNA1-201ENST00000335643 MICALL1Q8N3F8 863 aa16.67■□□□□ 0.26
KATNA1-201ENST00000335643 NEK9Q8TD19 979 aa16.67■□□□□ 0.26
KATNA1-201ENST00000335643 SLC7A3Q8WY07 619 aa16.67■□□□□ 0.26
KATNA1-201ENST00000335643 SCLT1Q96NL6 688 aa16.67■□□□□ 0.26
KATNA1-201ENST00000335643 IFT122Q9HBG6 1241 aa16.67■□□□□ 0.26
KATNA1-201ENST00000335643 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.67■□□□□ 0.26
KATNA1-201ENST00000335643 DENND3A2RUS2 1198 aa16.66■□□□□ 0.26
KATNA1-201ENST00000335643 POU3F3P20264 500 aaPredicted RBP16.66■□□□□ 0.26
KATNA1-201ENST00000335643 RARRES1P49788 294 aa16.66■□□□□ 0.26
KATNA1-201ENST00000335643 EPC2Q52LR7 807 aa16.66■□□□□ 0.26
KATNA1-201ENST00000335643 POTEGQ6S5H5 508 aa16.66■□□□□ 0.26
KATNA1-201ENST00000335643 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.66■□□□□ 0.26
KATNA1-201ENST00000335643 PRPF31Q8WWY3 499 aaKnown RBP16.66■□□□□ 0.26
KATNA1-201ENST00000335643 NLRP4Q96MN2 994 aa16.66■□□□□ 0.26
KATNA1-201ENST00000335643 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.66■□□□□ 0.26
KATNA1-201ENST00000335643 KIF3AQ9Y496 699 aa16.66■□□□□ 0.26
KATNA1-201ENST00000335643 COL4A3BPQ9Y5P4 624 aa16.66■□□□□ 0.26
KATNA1-201ENST00000335643 H3BQV1 296 aa16.65■□□□□ 0.26
KATNA1-201ENST00000335643 RFC5P40937 340 aa16.65■□□□□ 0.26
KATNA1-201ENST00000335643 DNM2P50570 870 aa16.65■□□□□ 0.26
KATNA1-201ENST00000335643 PAN2Q504Q3 1202 aaKnown RBP16.65■□□□□ 0.26
KATNA1-201ENST00000335643 FAM102BQ5T8I3 360 aa16.65■□□□□ 0.26
KATNA1-201ENST00000335643 LARP1BQ659C4 914 aaKnown RBP16.65■□□□□ 0.26
KATNA1-201ENST00000335643 SLC24A5Q71RS6 500 aa16.65■□□□□ 0.26
KATNA1-201ENST00000335643 OTUD6AQ7L8S5 288 aa16.65■□□□□ 0.26
KATNA1-201ENST00000335643 FIBCD1Q8N539 461 aa16.65■□□□□ 0.26
KATNA1-201ENST00000335643 MINDY3Q9H8M7 445 aa16.65■□□□□ 0.26
KATNA1-201ENST00000335643 HCSTQ9UBK5 93 aa16.65■□□□□ 0.26
KATNA1-201ENST00000335643 MRPL42Q9Y6G3 142 aaKnown RBP16.65■□□□□ 0.26
KATNA1-201ENST00000335643 C5orf42Q9H799 3197 aa16.64■□□□□ 0.26
KATNA1-201ENST00000335643 PP2D1A8MPX8 630 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 FXR2P51116 673 aaKnown RBP eCLIP16.64■□□□□ 0.25
KATNA1-201ENST00000335643 LAMTOR4Q0VGL1 99 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 BTG3Q14201 252 aaPredicted RBP16.64■□□□□ 0.25
KATNA1-201ENST00000335643 TMEM192Q8IY95 271 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 FBXO22Q8NEZ5 403 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 MTRQ99707 1265 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 GCOM2Q9BZD3 368 aaPredicted RBP16.64■□□□□ 0.25
KATNA1-201ENST00000335643 ANKEF1Q9NU02 776 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 PPME1Q9Y570 386 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 FGFR1P11362 822 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 RPA1P27694 616 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 FAM189BP81408 668 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 ODR4Q5SWX8 454 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 FERMT3Q86UX7 667 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 ZNF410Q86VK4 478 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 ZNF710Q8N1W2 664 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 ASAP3Q8TDY4 903 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 PSPC1Q8WXF1 523 aaKnown RBP16.64■□□□□ 0.25
KATNA1-201ENST00000335643 CLP1Q92989 425 aaKnown RBP16.64■□□□□ 0.25
KATNA1-201ENST00000335643 JPH2Q9BR39 696 aaPredicted RBP16.64■□□□□ 0.25
KATNA1-201ENST00000335643 POLR3CQ9BUI4 534 aaPredicted RBP16.64■□□□□ 0.25
KATNA1-201ENST00000335643 TUFT1Q9NNX1 390 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 C1orf112Q9NSG2 853 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 RNF19AQ9NV58 838 aa16.64■□□□□ 0.25
KATNA1-201ENST00000335643 PLXNA4Q9HCM2 1894 aa16.63■□□□□ 0.25
KATNA1-201ENST00000335643 STAG3L1P0CL83 205 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms