RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 LRRC71Q8N4P6 559 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 LINC01465Q8N7H1 131 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 U2AF1L4Q8WU68 220 aaKnown RBP23.81■■□□□ 1.4
TPM1-204ENST00000334895 BSNDQ8WZ55 320 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 DRC1Q96MC2 740 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 ANP32EQ9BTT0 268 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 POLR3FQ9H1D9 316 aaPredicted RBP23.81■■□□□ 1.4
TPM1-204ENST00000334895 TBC1D7Q9P0N9 293 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 NRCAMQ92823 1304 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 TRIP12Q14669 1992 aaPredicted RBP23.81■■□□□ 1.4
TPM1-204ENST00000334895 MOXD2PA6NHM9 499 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 GAP43P17677 238 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 ARL2P36404 184 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 FAM26FQ5R3K3 315 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 C11orf57Q6ZUT1 292 aaPredicted RBP23.81■■□□□ 1.4
TPM1-204ENST00000334895 CCDC47Q96A33 483 aaKnown RBP23.81■■□□□ 1.4
TPM1-204ENST00000334895 SLC39A2Q9NP94 309 aa23.81■■□□□ 1.4
TPM1-204ENST00000334895 RRN3P2A6NIE6 340 aa23.8■■□□□ 1.4
TPM1-204ENST00000334895 PLS3P13797 630 aa23.8■■□□□ 1.4
TPM1-204ENST00000334895 CD44P16070 742 aaKnown RBP23.8■■□□□ 1.4
TPM1-204ENST00000334895 MYCT1Q8N699 235 aa23.8■■□□□ 1.4
TPM1-204ENST00000334895 ASAP3Q8TDY4 903 aa23.8■■□□□ 1.4
TPM1-204ENST00000334895 KIFAP3Q92845 792 aa23.8■■□□□ 1.4
TPM1-204ENST00000334895 CRISPLD2Q9H0B8 497 aa23.8■■□□□ 1.4
TPM1-204ENST00000334895 SUGCTQ9HAC7 445 aa23.8■■□□□ 1.4
TPM1-204ENST00000334895 OLFML3Q9NRN5 406 aa23.8■■□□□ 1.4
TPM1-204ENST00000334895 PHF24Q9UPV7 400 aa23.8■■□□□ 1.4
TPM1-204ENST00000334895 MBLAC1A4D2B0 266 aaPredicted RBP23.79■■□□□ 1.4
TPM1-204ENST00000334895 DNM1LO00429 736 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 MAGEB2O15479 319 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 CABYRO75952 493 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 SGPL1O95470 568 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 GJA8P48165 433 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 CLCN3P51790 818 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 RTP1P59025 263 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 ZNF200P98182 395 aaPredicted RBP23.79■■□□□ 1.4
TPM1-204ENST00000334895 EFCAB12Q6NXP0 572 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 EXOC8Q8IYI6 725 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 C7orf31Q8N865 590 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 DNAJC25Q9H1X3 360 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 ANO10Q9NW15 660 aa23.79■■□□□ 1.4
TPM1-204ENST00000334895 MKI67P46013 3256 aaKnown RBP23.79■■□□□ 1.4
TPM1-204ENST00000334895 A0A1W2PQ45 241 aaPredicted RBP23.78■■□□□ 1.4
TPM1-204ENST00000334895 A0A1W2PQY0 241 aa23.78■■□□□ 1.4
TPM1-204ENST00000334895 GAS2O43903 313 aaKnown RBP23.78■■□□□ 1.4
TPM1-204ENST00000334895 GLRA2P23416 452 aa23.78■■□□□ 1.4
TPM1-204ENST00000334895 CASP5P51878 434 aa23.78■■□□□ 1.4
TPM1-204ENST00000334895 PSMD2Q13200 908 aa23.78■■□□□ 1.4
TPM1-204ENST00000334895 ANO6Q4KMQ2 910 aa23.78■■□□□ 1.4
TPM1-204ENST00000334895 ODR4Q5SWX8 454 aa23.78■■□□□ 1.4
TPM1-204ENST00000334895 GAS2L3Q86XJ1 694 aa23.78■■□□□ 1.4
TPM1-204ENST00000334895 JPH2Q9BR39 696 aaPredicted RBP23.78■■□□□ 1.4
TPM1-204ENST00000334895 SEL1LQ9UBV2 794 aa23.78■■□□□ 1.4
TPM1-204ENST00000334895 GTF2IRD1Q9UHL9 959 aa23.78■■□□□ 1.4
TPM1-204ENST00000334895 C17orf102A2RUQ5 167 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 PPP1R3GB7ZBB8 358 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 EN2P19622 333 aaPredicted RBP23.77■■□□□ 1.4
TPM1-204ENST00000334895 MNX1P50219 401 aaPredicted RBP23.77■■□□□ 1.4
TPM1-204ENST00000334895 IER5Q5VY09 327 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 NFRKBQ6P4R8 1299 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 SESTD1Q86VW0 696 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 METTL13Q8N6R0 699 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 TSPY26PQ9H489 355 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 LARSQ9P2J5 1176 aaKnown RBP23.77■■□□□ 1.4
TPM1-204ENST00000334895 MAPK8IP1Q9UQF2 711 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 KBTBD13C9JR72 458 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 TREHO43280 583 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 NMT1P30419 496 aaKnown RBP23.77■■□□□ 1.4
TPM1-204ENST00000334895 PRCPP42785 496 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 PEX3P56589 373 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 MLKLQ8NB16 471 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 GLT1D1Q96MS3 346 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 C17orf75Q9HAS0 396 aa23.77■■□□□ 1.4
TPM1-204ENST00000334895 DNAH12Q6ZR08 3092 aa23.76■■□□□ 1.39
TPM1-204ENST00000334895 MYBP10242 640 aa23.76■■□□□ 1.39
TPM1-204ENST00000334895 NPTX2P47972 431 aa23.76■■□□□ 1.39
TPM1-204ENST00000334895 ITGA7Q13683 1181 aa23.76■■□□□ 1.39
TPM1-204ENST00000334895 GDF6Q6KF10 455 aaPredicted RBP23.76■■□□□ 1.39
TPM1-204ENST00000334895 RUFY4Q6ZNE9 571 aa23.76■■□□□ 1.39
TPM1-204ENST00000334895 EPM2AIP1Q7L775 607 aaPredicted RBP23.76■■□□□ 1.39
TPM1-204ENST00000334895 FAM178BQ8IXR5 827 aa23.76■■□□□ 1.39
TPM1-204ENST00000334895 RETREG2Q8NC44 543 aa23.76■■□□□ 1.39
TPM1-204ENST00000334895 TCP11Q8WWU5 503 aa23.76■■□□□ 1.39
TPM1-204ENST00000334895 PRPF31Q8WWY3 499 aaKnown RBP23.76■■□□□ 1.39
TPM1-204ENST00000334895 KIFC3Q9BVG8 833 aa23.76■■□□□ 1.39
TPM1-204ENST00000334895 MRPL44Q9H9J2 332 aaKnown RBP23.76■■□□□ 1.39
TPM1-204ENST00000334895 SUCLA2Q9P2R7 463 aaPredicted RBP23.76■■□□□ 1.39
TPM1-204ENST00000334895 ADGRA3Q8IWK6 1321 aa23.75■■□□□ 1.39
TPM1-204ENST00000334895 TFRCP02786 760 aaKnown RBP23.75■■□□□ 1.39
TPM1-204ENST00000334895 NCKAP1LP55160 1127 aa23.75■■□□□ 1.39
TPM1-204ENST00000334895 COBLL1Q53SF7 1204 aa23.75■■□□□ 1.39
TPM1-204ENST00000334895 ZNF720Q7Z2F6 126 aa23.75■■□□□ 1.39
TPM1-204ENST00000334895 KSR1Q8IVT5 923 aa23.75■■□□□ 1.39
TPM1-204ENST00000334895 KIAA0319LQ8IZA0 1049 aa23.75■■□□□ 1.39
TPM1-204ENST00000334895 ADSSL1Q8N142 457 aa23.75■■□□□ 1.39
TPM1-204ENST00000334895 SPIRE2Q8WWL2 714 aa23.75■■□□□ 1.39
TPM1-204ENST00000334895 CTAGE1Q96RT6 745 aa23.75■■□□□ 1.39
TPM1-204ENST00000334895 NTPCRQ9BSD7 190 aaKnown RBP23.75■■□□□ 1.39
TPM1-204ENST00000334895 STRA6Q9BX79 667 aa23.75■■□□□ 1.39
TPM1-204ENST00000334895 PPP1R37O75864 691 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms