RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 GLT1D1Q96MS3 346 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 CUEDC2Q9H467 287 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 ATP6V0A4Q9HBG4 840 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 C17orf102A2RUQ5 167 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 ZEB2O60315 1214 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 COL6A1P12109 1028 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 GLRA2P23416 452 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 EHHADHQ08426 723 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 RBM43Q6ZSC3 357 aaKnown RBP18.31■□□□□ 0.52
SHOX-201ENST00000334060 KIAA0319LQ8IZA0 1049 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 KIAA0895Q8NCT3 520 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 DNAJB3Q8WWF6 145 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 SLC39A2Q9NP94 309 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 KIAA1468Q9P260 1216 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 PCDHA2Q9Y5H9 948 aa18.31■□□□□ 0.52
SHOX-201ENST00000334060 MBLAC1A4D2B0 266 aaPredicted RBP18.3■□□□□ 0.52
SHOX-201ENST00000334060 SLC26A4O43511 780 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 DGAT1O75907 488 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 CD44P16070 742 aaKnown RBP18.3■□□□□ 0.52
SHOX-201ENST00000334060 GUCY2CP25092 1073 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 ZC2HC1CQ53FD0 456 aaPredicted RBP18.3■□□□□ 0.52
SHOX-201ENST00000334060 TSEN34Q9BSV6 310 aaKnown RBP18.3■□□□□ 0.52
SHOX-201ENST00000334060 PANK4Q9NVE7 773 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 NRCAMQ92823 1304 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 FRMD3A2A2Y4 597 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 TTLL13PA6NNM8 815 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 DKC1O60832 514 aaKnown RBP eCLIP18.3■□□□□ 0.52
SHOX-201ENST00000334060 MYBP10242 640 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 ZNF484Q5JVG2 852 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 PRPF31Q8WWY3 499 aaKnown RBP18.3■□□□□ 0.52
SHOX-201ENST00000334060 SLC7A3Q8WY07 619 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 KATNAL1Q9BW62 490 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 USP25Q9UHP3 1055 aa18.3■□□□□ 0.52
SHOX-201ENST00000334060 KAT6AQ92794 2004 aa18.29■□□□□ 0.52
SHOX-201ENST00000334060 CLCN1P35523 988 aa18.29■□□□□ 0.52
SHOX-201ENST00000334060 ARL2P36404 184 aa18.29■□□□□ 0.52
SHOX-201ENST00000334060 PEX3P56589 373 aa18.29■□□□□ 0.52
SHOX-201ENST00000334060 CAPSQ13938 189 aa18.29■□□□□ 0.52
SHOX-201ENST00000334060 DPCR1Q3MIW9 517 aa18.29■□□□□ 0.52
SHOX-201ENST00000334060 RHPN2Q8IUC4 686 aa18.29■□□□□ 0.52
SHOX-201ENST00000334060 SLC43A3Q8NBI5 491 aa18.29■□□□□ 0.52
SHOX-201ENST00000334060 GINS2Q9Y248 185 aa18.29■□□□□ 0.52
SHOX-201ENST00000334060 UMODL1Q5DID0 1318 aa18.29■□□□□ 0.52
SHOX-201ENST00000334060 SLC16A4O15374 487 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 KPNA6O60684 536 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 PQBP1O60828 265 aaKnown RBP18.28■□□□□ 0.52
SHOX-201ENST00000334060 CTSHP09668 335 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 FGFR4P22455 802 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 PTGISQ16647 500 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 LRRC26Q2I0M4 334 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 KIZQ2M2Z5 673 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 TRIM60Q495X7 471 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 MYCT1Q8N699 235 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 TMEM40Q8WWA1 233 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 TMEM106CQ9BVX2 250 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 MINDY3Q9H8M7 445 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 SUCLA2Q9P2R7 463 aaPredicted RBP18.28■□□□□ 0.52
SHOX-201ENST00000334060 TISP43B9A030 160 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 ARVCFO00192 962 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 IQCF3P0C7M6 154 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 SRGAP2CP0DJJ0 459 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 CDK7P50613 346 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 ZNF131P52739 623 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 HERC4Q5GLZ8 1057 aaPredicted RBP18.28■□□□□ 0.52
SHOX-201ENST00000334060 C11orf57Q6ZUT1 292 aaPredicted RBP18.28■□□□□ 0.52
SHOX-201ENST00000334060 UNC13DQ70J99 1090 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 TAS1R3Q7RTX0 852 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 SMARCE1Q969G3 411 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 ABHD8Q96I13 439 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 NLRP4Q96MN2 994 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 PYM1Q9BRP8 204 aaKnown RBP18.28■□□□□ 0.52
SHOX-201ENST00000334060 FUCA2Q9BTY2 467 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 MAGEF1Q9HAY2 307 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 LOXHD1Q8IVV2 1947 aa18.28■□□□□ 0.52
SHOX-201ENST00000334060 MYH11P35749 1972 aa18.27■□□□□ 0.52
SHOX-201ENST00000334060 SIP14410 1827 aa18.27■□□□□ 0.52
SHOX-201ENST00000334060 FAM13AO94988 1023 aa18.27■□□□□ 0.52
SHOX-201ENST00000334060 HOXD13P35453 343 aa18.27■□□□□ 0.52
SHOX-201ENST00000334060 NPTX2P47972 431 aa18.27■□□□□ 0.52
SHOX-201ENST00000334060 ODR4Q5SWX8 454 aa18.27■□□□□ 0.52
SHOX-201ENST00000334060 NT5DC1Q5TFE4 455 aa18.27■□□□□ 0.52
SHOX-201ENST00000334060 SLC39A5Q6ZMH5 540 aa18.27■□□□□ 0.52
SHOX-201ENST00000334060 FAM126BQ8IXS8 530 aa18.27■□□□□ 0.52
SHOX-201ENST00000334060 MED15Q96RN5 788 aa18.27■□□□□ 0.52
SHOX-201ENST00000334060 AKT3Q9Y243 479 aa18.27■□□□□ 0.52
SHOX-201ENST00000334060 COL1A2P08123 1366 aa18.26■□□□□ 0.51
SHOX-201ENST00000334060 A0A0U1RQG5 324 aaPredicted RBP18.26■□□□□ 0.51
SHOX-201ENST00000334060 RFC5P40937 340 aa18.26■□□□□ 0.51
SHOX-201ENST00000334060 LAMTOR4Q0VGL1 99 aa18.26■□□□□ 0.51
SHOX-201ENST00000334060 MORC3Q14149 939 aa18.26■□□□□ 0.51
SHOX-201ENST00000334060 SKOR2Q2VWA4 1001 aaPredicted RBP18.26■□□□□ 0.51
SHOX-201ENST00000334060 CNNM4Q6P4Q7 775 aa18.26■□□□□ 0.51
SHOX-201ENST00000334060 A0A087WZ62 844 aa18.26■□□□□ 0.51
SHOX-201ENST00000334060 TBCAO75347 108 aaKnown RBP18.26■□□□□ 0.51
SHOX-201ENST00000334060 PRPF6O94906 941 aaKnown RBP18.26■□□□□ 0.51
SHOX-201ENST00000334060 UBE2Q1Q7Z7E8 422 aa18.26■□□□□ 0.51
SHOX-201ENST00000334060 SERINC5Q86VE9 423 aa18.26■□□□□ 0.51
SHOX-201ENST00000334060 FDXACB1Q9BRP7 624 aaPredicted RBP18.26■□□□□ 0.51
SHOX-201ENST00000334060 RANBP2P49792 3224 aaKnown RBP18.26■□□□□ 0.51
SHOX-201ENST00000334060 CCDC169A6NNP5 214 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms