RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 TRAPPC10P48553 1259 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 SARSP49591 514 aaKnown RBP12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 WDR5P61964 334 aaKnown RBP12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 ITGB3BPQ13352 177 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 TCTN1Q2MV58 587 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 PPP2R2DQ66LE6 453 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 CNKSR3Q6P9H4 555 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 VSTM4Q8IW00 320 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 SLC17A8Q8NDX2 589 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 ZNF397Q8NF99 534 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 CCDC148Q8NFR7 591 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 MAFAQ8NHW3 353 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 CRYGNQ8WXF5 182 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 SEPT1Q8WYJ6 367 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 SMARCE1Q969G3 411 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 AIFM3Q96NN9 605 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 TMX1Q9H3N1 280 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 SLC28A3Q9HAS3 691 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 AGO4Q9HCK5 861 aaKnown RBP12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 C6orf50Q9HD87 102 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 GJB4Q9NTQ9 266 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 ERAP1Q9NZ08 941 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 VPS54Q9P1Q0 977 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 SLC9A2Q9UBY0 812 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 PCDHA11Q9Y5I1 949 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 ATG2AQ2TAZ0 1938 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 BTBD18B2RXH4 712 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 FAM86B1E9PN63 330 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 BIN1O00499 593 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 ARHGAP6O43182 974 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 FAM86B2P0C5J1 330 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 PNOCQ13519 176 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 LONRF3Q496Y0 759 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 ARMCX5Q6P1M9 558 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 RASGRP4Q8TDF6 673 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 GLG1Q92896 1179 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 PPP1R13BQ96KQ4 1090 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 PRDM12Q9H4Q4 367 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 OGFRQ9NZT2 677 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 PCDHA5Q9Y5H7 936 aa12.32□□□□□ -0.44
APOBEC3B-201ENST00000333467 VCANP13611 3396 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 NRCAMQ92823 1304 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 IGLV3-22A0A075B6J6 115 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 RSPH10B2B2RC85 870 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 DDX39AO00148 427 aaKnown RBP12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 MEIS1O00470 390 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 CA3P07451 260 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 RSPH10BP0C881 870 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 GNAT1P11488 350 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 GNA11P29992 359 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 KRT2P35908 639 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 ZNF76P36508 570 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 TOB1P50616 345 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 ACTR2P61160 394 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 FAM193AP78312 1265 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 ADAM17P78536 824 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 DEFB103AP81534 67 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 PPFIA1Q13136 1202 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 MORC3Q14149 939 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 E4F1Q66K89 784 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 TMCO2Q7Z6W1 182 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 HERC6Q8IVU3 1022 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 PCYT2Q99447 389 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 GTPBP4Q9BZE4 634 aaKnown RBP12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 HSD3B7Q9H2F3 369 aa12.31□□□□□ -0.44
APOBEC3B-201ENST00000333467 ARID2Q68CP9 1835 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 STX10O60499 249 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 CAND2O75155 1236 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 LGR5O75473 907 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 TPM1P09493 284 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 ZNF18P17022 549 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 ETF1P62495 437 aaKnown RBP12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 SETQ01105 290 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 ARID5BQ14865 1188 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 GRIK4Q16099 956 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 MCTP2Q6DN12 878 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 NIPA1Q7RTP0 329 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 PHOSPHO2Q8TCD6 241 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 ERCC4Q92889 916 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 GAS2L1Q99501 681 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 PHF20Q9BVI0 1012 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 SMARCAD1Q9H4L7 1026 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 COL4A6Q14031 1691 aa12.3□□□□□ -0.44
APOBEC3B-201ENST00000333467 XIRP2A4UGR9 3374 aa12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 USP27XA6NNY8 438 aa12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 CYP3A4P08684 503 aa12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 RUFY4Q6ZNE9 571 aa12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 ZNF592Q92610 1267 aa12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 CLIC6Q96NY7 704 aa12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 GSDMAQ96QA5 445 aa12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 UIMC1Q96RL1 719 aa12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 NAA15Q9BXJ9 866 aaKnown RBP12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 AZI2Q9H6S1 392 aa12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 MAN1B1Q9UKM7 699 aa12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 TRPC6Q9Y210 931 aa12.29□□□□□ -0.44
APOBEC3B-201ENST00000333467 ABHD14A-ACY1A0A1B0GW23 586 aa12.28□□□□□ -0.44
APOBEC3B-201ENST00000333467 IPO5O00410 1097 aaKnown RBP12.28□□□□□ -0.44
APOBEC3B-201ENST00000333467 POLR2DO15514 142 aaKnown RBP12.28□□□□□ -0.44
APOBEC3B-201ENST00000333467 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms