RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 ZNF484Q5JVG2 852 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 SPATA1Q5VX52 437 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 CENPPQ6IPU0 288 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 TTI2Q6NXR4 508 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 ZNF720Q7Z2F6 126 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 TMEM143Q96AN5 459 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 POLR3FQ9H1D9 316 aaPredicted RBP13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 SEMA6BQ9H3T3 888 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 C17orf75Q9HAS0 396 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 XPNPEP3Q9NQH7 507 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 COL1A2P08123 1366 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 SCN10AQ9Y5Y9 1956 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 K7ENM7 598 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 HAS3O00219 553 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 EIF3DO15371 548 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 GAS2O43903 313 aaKnown RBP13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 GCNT3O95395 438 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 C22orf31O95567 290 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 MYL3P08590 195 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 MAPTP10636 758 aaKnown RBP13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 HOXD13P35453 343 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 ARL2P36404 184 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 NCKAP1LP55160 1127 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 PEX3P56589 373 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 PURAQ00577 322 aaKnown RBP13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 DMP1Q13316 513 aaPredicted RBP13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 STRA6Q9BX79 667 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 ST6GALNAC4Q9H4F1 302 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 FANCLQ9NW38 375 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 DDX20Q9UHI6 824 aaKnown RBP13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 KAT6AQ92794 2004 aa13.33□□□□□ -0.27
TRIM49B-201ENST00000332682 UBE4BO95155 1302 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 BICDL2A1A5D9 508 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 PRPF6O94906 941 aaKnown RBP13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 KIF20AO95235 890 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 ZNF18P17022 549 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 NPTX2P47972 431 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 PPFIA1Q13136 1202 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 DRP2Q13474 957 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 MFSD10Q14728 455 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 GRIK4Q16099 956 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 KIAA0753Q2KHM9 967 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 ZCWPW2Q504Y3 356 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 ZC2HC1CQ53FD0 456 aaPredicted RBP13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 GNASQ5JWF2 1037 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 ANKRD40Q6AI12 368 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 FOXR2Q6PJQ5 311 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 NELFCDQ8IXH7 590 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 EXOC8Q8IYI6 725 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 ASAP3Q8TDY4 903 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 SPIRE2Q8WWL2 714 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 ZBTB10Q96DT7 871 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 DUSP9Q99956 384 aaKnown RBP13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 JPH2Q9BR39 696 aaPredicted RBP13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 KIFC3Q9BVG8 833 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 KCTD10Q9H3F6 313 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 SPC25Q9HBM1 224 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 PTPN22Q9Y2R2 807 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 ZMYM2Q9UBW7 1377 aa13.33□□□□□ -0.28
TRIM49B-201ENST00000332682 EVPLQ92817 2033 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 SIP14410 1827 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 ADGRA3Q8IWK6 1321 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 SLC16A4O15374 487 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 AP5Z1O43299 807 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 KPNA6O60684 536 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 SMIM10L2AP0DMW4 78 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 SMIM10L2BP0DMW5 78 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 GLRA2P23416 452 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 CST5P28325 142 aaPredicted RBP13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 PSEN2P49810 448 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 TPM4P67936 248 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 IGBP1P78318 339 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 LRRC63Q05C16 580 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 KCNA1Q09470 495 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 KNOP1Q1ED39 458 aaKnown RBP13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 CDKAL1Q5VV42 579 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 STXBP4Q6ZWJ1 553 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 LRRC71Q8N4P6 559 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 LINC01465Q8N7H1 131 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 SLC17A8Q8NDX2 589 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 TMEM161BQ8NDZ6 487 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 KLHDC9Q8NEP7 349 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 NTPCRQ9BSD7 190 aaKnown RBP13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 KATNAL1Q9BW62 490 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 SUGCTQ9HAC7 445 aa13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 SAMSN1Q9NSI8 373 aaKnown RBP13.32□□□□□ -0.28
TRIM49B-201ENST00000332682 CCDC169A6NNP5 214 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 MAGEB2O15479 319 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 MSCO60682 206 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 ATP1A3P13637 1013 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 KLRC1P26715 233 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 SMTNP53814 917 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 GTF2BQ00403 316 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 ALCAMQ13740 583 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 MARCH8Q5T0T0 291 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 IER5Q5VY09 327 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 CCSAPQ6IQ19 270 aaPredicted RBP13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 HAUS6Q7Z4H7 955 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms