RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 TSG101Q99816 390 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 TIAM2Q8IVF5 1701 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 LRRC41Q15345 812 aa19.64■□□□□ 0.73
PKP3-201ENST00000331563 ASIC2Q16515 512 aa19.64■□□□□ 0.73
PKP3-201ENST00000331563 AKT1S1Q96B36 256 aa19.64■□□□□ 0.73
PKP3-201ENST00000331563 KANSL2Q9H9L4 492 aa19.64■□□□□ 0.73
PKP3-201ENST00000331563 MKNK2Q9HBH9 465 aa19.64■□□□□ 0.73
PKP3-201ENST00000331563 ZSCAN9O15535 394 aaPredicted RBP19.64■□□□□ 0.73
PKP3-201ENST00000331563 EPS15P42566 896 aa19.64■□□□□ 0.73
PKP3-201ENST00000331563 TECP42680 631 aa19.64■□□□□ 0.73
PKP3-201ENST00000331563 SLCO1A2P46721 670 aa19.64■□□□□ 0.73
PKP3-201ENST00000331563 IFI35P80217 286 aaPredicted RBP19.64■□□□□ 0.73
PKP3-201ENST00000331563 LRRC23Q53EV4 343 aaPredicted RBP19.64■□□□□ 0.73
PKP3-201ENST00000331563 MGARPQ8TDB4 240 aa19.64■□□□□ 0.73
PKP3-201ENST00000331563 RTFDC1Q9BY42 306 aaPredicted RBP19.64■□□□□ 0.73
PKP3-201ENST00000331563 ZMYND12Q9H0C1 365 aa19.64■□□□□ 0.73
PKP3-201ENST00000331563 IL17RBQ9NRM6 502 aa19.64■□□□□ 0.73
PKP3-201ENST00000331563 DPPA5A6NC42 116 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 CCDC169A6NNP5 214 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 ALADP13716 330 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 MSH2P43246 934 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 SCNN1DP51172 638 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 PICALMQ13492 652 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 PRPF4BQ13523 1007 aaKnown RBP19.63■□□□□ 0.73
PKP3-201ENST00000331563 C12orf60Q5U649 245 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 ADAT2Q7Z6V5 191 aaKnown RBP19.63■□□□□ 0.73
PKP3-201ENST00000331563 PLEKHG4BQ96PX9 1271 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 PDGFDQ9GZP0 370 aaPredicted RBP19.63■□□□□ 0.73
PKP3-201ENST00000331563 CCDC88AQ3V6T2 1871 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 DUOX1Q9NRD9 1551 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 CES2O00748 559 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 HOXA10P31260 410 aaPredicted RBP19.63■□□□□ 0.73
PKP3-201ENST00000331563 SV2BQ7L1I2 683 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 TEX9Q8N6V9 391 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 CALML4Q96GE6 196 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 CPVLQ9H3G5 476 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 SLITRK6Q9H5Y7 841 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 ARHGEF10LQ9HCE6 1279 aa19.63■□□□□ 0.73
PKP3-201ENST00000331563 ARPP21Q9UBL0 812 aaPredicted RBP19.63■□□□□ 0.73
PKP3-201ENST00000331563 TRAF5O00463 557 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 MMP13P45452 471 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 COPS2P61201 443 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 MXRA7P84157 204 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 LETM2Q2VYF4 491 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 NLGN1Q8N2Q7 840 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 NEK9Q8TD19 979 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 NAF1Q96HR8 494 aaKnown RBP19.62■□□□□ 0.73
PKP3-201ENST00000331563 ZCWPW1Q9H0M4 648 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 RGS17Q9UGC6 210 aaPredicted RBP19.62■□□□□ 0.73
PKP3-201ENST00000331563 BAG3O95817 575 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 FGRP09769 529 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 ABCD1P33897 745 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 PCK1P35558 622 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 PDE6CP51160 858 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 CUL3Q13618 768 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 SEPT2Q15019 361 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 CCDC38Q502W7 563 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 PPP1R15BQ5SWA1 713 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 POTEAQ6S8J7 498 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 TEKT4Q8WW24 435 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 KCNMB3Q9NPA1 279 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 STX8Q9UNK0 236 aa19.62■□□□□ 0.73
PKP3-201ENST00000331563 A0A1B0GVG6 124 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 LRRD1A4D1F6 860 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 CCNT1O60563 726 aaKnown RBP19.61■□□□□ 0.73
PKP3-201ENST00000331563 HIP1RO75146 1068 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 PLTPP55058 493 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 LRRC14Q15048 493 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 HEATR3Q7Z4Q2 680 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 RAB17Q9H0T7 212 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 BLOC1S6Q9UL45 172 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 TRIM33Q9UPN9 1127 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 SNX3O60493 162 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 NOL4O94818 638 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 SUN1O94901 812 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 ECEL1O95672 775 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 IL1R1P14778 569 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 ZNF131P52739 623 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 PMS2P54278 862 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 LRRC63Q05C16 580 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 SYN2Q92777 582 aaPredicted RBP19.61■□□□□ 0.73
PKP3-201ENST00000331563 CDK5RAP3Q96JB5 506 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 CRAMP1Q96RY5 1269 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 DBNDD1Q9H9R9 158 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 USP15Q9Y4E8 981 aaPredicted RBP19.61■□□□□ 0.73
PKP3-201ENST00000331563 PDHA1P08559 390 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 OR52Z1P0C646 297 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 EN1Q05925 392 aaPredicted RBP19.61■□□□□ 0.73
PKP3-201ENST00000331563 ATL2Q8NHH9 583 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 FGFR1OP2Q9NVK5 253 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 ADAM22Q9P0K1 906 aa19.61■□□□□ 0.73
PKP3-201ENST00000331563 FLT1P17948 1338 aa19.6■□□□□ 0.73
PKP3-201ENST00000331563 CHRNA5P30532 468 aa19.6■□□□□ 0.73
PKP3-201ENST00000331563 NUGGCQ68CJ6 796 aa19.6■□□□□ 0.73
PKP3-201ENST00000331563 SDCCAG8Q86SQ7 713 aaPredicted RBP19.6■□□□□ 0.73
PKP3-201ENST00000331563 CERS5Q8N5B7 392 aa19.6■□□□□ 0.73
PKP3-201ENST00000331563 MMTAG2Q9BU76 263 aaKnown RBP19.6■□□□□ 0.73
PKP3-201ENST00000331563 ZC3H12CQ9C0D7 883 aaKnown RBP19.6■□□□□ 0.73
PKP3-201ENST00000331563 ADAM7Q9H2U9 754 aa19.6■□□□□ 0.73
PKP3-201ENST00000331563 PCDHA6Q9UN73 950 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms