RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 SOX10P56693 466 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 POLR2FP61218 127 aaKnown RBP18.59■□□□□ 0.57
DDX41-201ENST00000330503 EIF3CQ99613 913 aaKnown RBP18.59■□□□□ 0.57
DDX41-201ENST00000330503 DNAJC25-GNG10A0A024R161 153 aa18.58■□□□□ 0.57
DDX41-201ENST00000330503 TISP43B9A030 160 aa18.58■□□□□ 0.57
DDX41-201ENST00000330503 ACTN1P12814 892 aa18.58■□□□□ 0.57
DDX41-201ENST00000330503 CYLC1P35663 651 aaPredicted RBP18.58■□□□□ 0.57
DDX41-201ENST00000330503 PRKCEQ02156 737 aa18.58■□□□□ 0.57
DDX41-201ENST00000330503 MYBPC2Q14324 1141 aa18.58■□□□□ 0.57
DDX41-201ENST00000330503 DCAF17Q5H9S7 520 aaPredicted RBP18.58■□□□□ 0.57
DDX41-201ENST00000330503 CACNA2D4Q7Z3S7 1137 aa18.58■□□□□ 0.57
DDX41-201ENST00000330503 TMEM174Q8WUU8 243 aa18.58■□□□□ 0.57
DDX41-201ENST00000330503 BSNDQ8WZ55 320 aa18.58■□□□□ 0.57
DDX41-201ENST00000330503 TMEM206Q9H813 350 aa18.58■□□□□ 0.57
DDX41-201ENST00000330503 ZNF408Q9H9D4 720 aa18.58■□□□□ 0.57
DDX41-201ENST00000330503 IGSF9BQ9UPX0 1349 aa18.58■□□□□ 0.56
DDX41-201ENST00000330503 ZNF263O14978 683 aa18.58■□□□□ 0.56
DDX41-201ENST00000330503 TLR2O60603 784 aa18.58■□□□□ 0.56
DDX41-201ENST00000330503 UBA1P22314 1058 aaKnown RBP18.58■□□□□ 0.56
DDX41-201ENST00000330503 PON1P27169 355 aa18.58■□□□□ 0.56
DDX41-201ENST00000330503 TCERG1LQ5VWI1 586 aa18.58■□□□□ 0.56
DDX41-201ENST00000330503 HGSNATQ68CP4 663 aa18.58■□□□□ 0.56
DDX41-201ENST00000330503 GPIHBP1Q8IV16 184 aa18.58■□□□□ 0.56
DDX41-201ENST00000330503 PLCB1Q9NQ66 1216 aa18.58■□□□□ 0.56
DDX41-201ENST00000330503 CYP26B1Q9NR63 512 aa18.58■□□□□ 0.56
DDX41-201ENST00000330503 ZNF215Q9UL58 517 aaPredicted RBP18.58■□□□□ 0.56
DDX41-201ENST00000330503 MAFBQ9Y5Q3 323 aaPredicted RBP18.58■□□□□ 0.56
DDX41-201ENST00000330503 IGKV6D-21A0A0A0MT36 114 aa18.57■□□□□ 0.56
DDX41-201ENST00000330503 GSTTP1A0A1W2PQM5 241 aa18.57■□□□□ 0.56
DDX41-201ENST00000330503 COPB2P35606 906 aa18.57■□□□□ 0.56
DDX41-201ENST00000330503 EIF4A3P38919 411 aaKnown RBP18.57■□□□□ 0.56
DDX41-201ENST00000330503 NPTX2P47972 431 aa18.57■□□□□ 0.56
DDX41-201ENST00000330503 ARHGAP29Q52LW3 1261 aa18.57■□□□□ 0.56
DDX41-201ENST00000330503 XKR3Q5GH77 459 aa18.57■□□□□ 0.56
DDX41-201ENST00000330503 TMEM161BQ8NDZ6 487 aa18.57■□□□□ 0.56
DDX41-201ENST00000330503 SYN2Q92777 582 aaPredicted RBP18.57■□□□□ 0.56
DDX41-201ENST00000330503 XPNPEP1Q9NQW7 623 aa18.57■□□□□ 0.56
DDX41-201ENST00000330503 TRIM10Q9UDY6 481 aa18.57■□□□□ 0.56
DDX41-201ENST00000330503 TFR2Q9UP52 801 aa18.57■□□□□ 0.56
DDX41-201ENST00000330503 ARID2Q68CP9 1835 aa18.57■□□□□ 0.56
DDX41-201ENST00000330503 RCCD1A6NED2 376 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 UNCXA6NJT0 531 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 KIF5CO60282 957 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 CYP2C8P10632 490 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 KRT83P78385 493 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 NAA30Q147X3 362 aaPredicted RBP18.56■□□□□ 0.56
DDX41-201ENST00000330503 EXOC3L4Q17RC7 722 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 ZNF662Q6ZS27 426 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 C12orf56Q8IXR9 622 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 MMP19Q99542 508 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 NTPCRQ9BSD7 190 aaKnown RBP18.56■□□□□ 0.56
DDX41-201ENST00000330503 SIX2Q9NPC8 291 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 ZNF302Q9NR11 478 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 SEPT9Q9UHD8 586 aaPredicted RBP18.56■□□□□ 0.56
DDX41-201ENST00000330503 FRMD4BQ9Y2L6 1034 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 URI1O94763 535 aaPredicted RBP18.56■□□□□ 0.56
DDX41-201ENST00000330503 FARP2O94887 1054 aaPredicted RBP18.56■□□□□ 0.56
DDX41-201ENST00000330503 SLU7O95391 586 aaKnown RBP18.56■□□□□ 0.56
DDX41-201ENST00000330503 ERVK-9P63128 1117 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 CYP27A1Q02318 531 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 ASTE1Q2TB18 679 aaPredicted RBP18.56■□□□□ 0.56
DDX41-201ENST00000330503 ZNF569Q5MCW4 686 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 KLHDC7AQ5VTJ3 777 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 EEPD1Q7L9B9 569 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 SPIRE2Q8WWL2 714 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 KIFAP3Q92845 792 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 MS4A4AQ96JQ5 239 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 CCDC42Q96M95 316 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 PCYT2Q99447 389 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 PCIF1Q9H4Z3 704 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 LRRC37A2A6NM11 1700 aa18.56■□□□□ 0.56
DDX41-201ENST00000330503 EXOC3O60645 756 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 DGAT1O75907 488 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 LCA5LO95447 670 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 TGFB3P10600 412 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 GBP6Q6ZN66 633 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 SLC17A8Q8NDX2 589 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 CBWD1Q9BRT8 395 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 KIFC3Q9BVG8 833 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 NUCKS1Q9H1E3 243 aaKnown RBP18.55■□□□□ 0.56
DDX41-201ENST00000330503 MROH8Q9H579 483 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 CGNQ9P2M7 1197 aaKnown RBP18.55■□□□□ 0.56
DDX41-201ENST00000330503 TBX20Q9UMR3 447 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 MYH9P35579 1960 aaKnown RBP18.55■□□□□ 0.56
DDX41-201ENST00000330503 GTPBP10A4D1E9 387 aaKnown RBP18.55■□□□□ 0.56
DDX41-201ENST00000330503 CCDC169A6NNP5 214 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
DDX41-201ENST00000330503 KCTD2Q14681 263 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 LY6KQ17RY6 165 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 SFMBT2Q5VUG0 894 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 RDH13Q8NBN7 331 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 LRRN4CLQ8ND94 238 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 ZSWIM2Q8NEG5 633 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 LACRTQ9GZZ8 138 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 PORCNQ9H237 461 aa18.55■□□□□ 0.56
DDX41-201ENST00000330503 ANKRD63C9JTQ0 380 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 ARIH2O95376 493 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 SMTNP53814 917 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 NEDD9Q14511 834 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 MTERF2Q49AM1 385 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms