RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 ZNF579Q8NAF0 562 aaKnown RBP23.42■■□□□ 1.34
TNFRSF18-201ENST00000328596 GDPD5Q8WTR4 605 aa23.42■■□□□ 1.34
TNFRSF18-201ENST00000328596 SLC7A3Q8WY07 619 aa23.42■■□□□ 1.34
TNFRSF18-201ENST00000328596 ZNF689Q96CS4 500 aaPredicted RBP23.42■■□□□ 1.34
TNFRSF18-201ENST00000328596 DHX33Q9H6R0 707 aaKnown RBP23.42■■□□□ 1.34
TNFRSF18-201ENST00000328596 RGS18Q9NS28 235 aa23.42■■□□□ 1.34
TNFRSF18-201ENST00000328596 C1orf112Q9NSG2 853 aa23.42■■□□□ 1.34
TNFRSF18-201ENST00000328596 ADGRA3Q8IWK6 1321 aa23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 POTEMA6NI47 508 aa23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 LYPLA2O95372 231 aa23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 OR52Z1P0C646 297 aa23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 DARSP14868 501 aaKnown RBP23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 RFC5P40937 340 aa23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 POLGP54098 1239 aaPredicted RBP23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 CCDC85BQ15834 202 aaPredicted RBP23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 XKR9Q5GH70 373 aa23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 MICALL1Q8N3F8 863 aa23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 FBXO22Q8NEZ5 403 aa23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.41■■□□□ 1.34
TNFRSF18-201ENST00000328596 PRRC2BQ5JSZ5 2229 aaKnown RBP23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 ZBTB39O15060 712 aa23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 EPC2Q52LR7 807 aa23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 SLC24A5Q71RS6 500 aa23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 ZNF410Q86VK4 478 aa23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 RHPN2Q8IUC4 686 aa23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 TMEM192Q8IY95 271 aa23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 GCOM2Q9BZD3 368 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 RNF216Q9NWF9 866 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 LMCD1Q9NZU5 365 aa23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 LRFN2Q9ULH4 789 aa23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 SMC3Q9UQE7 1217 aa23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 PCDHB7Q9Y5E2 793 aa23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 UNC80Q8N2C7 3258 aa23.4■■□□□ 1.34
TNFRSF18-201ENST00000328596 COL4A4P53420 1690 aaPredicted RBP23.39■■□□□ 1.34
TNFRSF18-201ENST00000328596 C9IYK1 514 aa23.39■■□□□ 1.33
TNFRSF18-201ENST00000328596 TECP42680 631 aa23.39■■□□□ 1.33
TNFRSF18-201ENST00000328596 BTG3Q14201 252 aaPredicted RBP23.39■■□□□ 1.33
TNFRSF18-201ENST00000328596 DSC3Q14574 896 aa23.39■■□□□ 1.33
TNFRSF18-201ENST00000328596 A0A087WZ62 844 aa23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 GAS2O43903 313 aaKnown RBP23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 ZSCAN20P17040 1043 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 TOB1P50616 345 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 NBR1Q14596 966 aa23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 EMC2Q15006 297 aa23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 MCTP1Q6DN14 999 aa23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 CMTR2Q8IYT2 770 aaKnown RBP23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 C4orf32Q8N8J7 132 aa23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 FDXACB1Q9BRP7 624 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 ANKEF1Q9NU02 776 aa23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 RWDD3Q9Y3V2 267 aa23.38■■□□□ 1.33
TNFRSF18-201ENST00000328596 H3BQV1 296 aa23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 SPATA31C1P0DKV0 1188 aa23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 IBSPP21815 317 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 FAM189BP81408 668 aa23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 KSR1Q8IVT5 923 aa23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 TCP11Q8WWU5 503 aa23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 PSPC1Q8WXF1 523 aaKnown RBP23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 CLP1Q92989 425 aaKnown RBP23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 SNX21Q969T3 373 aa23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 TMEM143Q96AN5 459 aa23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 NLRP4Q96MN2 994 aa23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 INO80BQ9C086 356 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 TUFT1Q9NNX1 390 aa23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 BMP2KQ9NSY1 1161 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 PCDHB6Q9Y5E3 794 aa23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 COL4A3BPQ9Y5P4 624 aa23.37■■□□□ 1.33
TNFRSF18-201ENST00000328596 A0A0C4DFX4 3053 aa23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 CSDE1O75534 798 aaKnown RBP23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 LINC00271P0C7V0 271 aa23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 XRCC6P12956 609 aaKnown RBP eCLIP23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 FGFR4P22455 802 aa23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 CATSPER3Q86XQ3 398 aa23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 ERMNQ8TAM6 284 aa23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 PRPF31Q8WWY3 499 aaKnown RBP23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 MTRQ99707 1265 aa23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 POLR3CQ9BUI4 534 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 ELAC1Q9H777 363 aaKnown RBP23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 TMEM161AQ9NX61 479 aa23.36■■□□□ 1.33
TNFRSF18-201ENST00000328596 RALGAPA2Q2PPJ7 1873 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 NLRC5Q86WI3 1866 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 C5orf67F2Z3F1 127 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 H3BNC9 293 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 RB1P06400 928 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 SFPQP23246 707 aaKnown RBP eCLIP23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 CTNNB1P35222 781 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 BMPR1AP36894 532 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 RARRES1P49788 294 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 FXR2P51116 673 aaKnown RBP eCLIP23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 PTGDRQ13258 359 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 CUL4AQ13619 759 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 PIGOQ8TEQ8 1089 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 CCDC43Q96MW1 224 aaKnown RBP23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 IFT122Q9HBG6 1241 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 PRDM6Q9NQX0 595 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 ARID2Q68CP9 1835 aa23.35■■□□□ 1.33
TNFRSF18-201ENST00000328596 ASAP2O43150 1006 aa23.34■■□□□ 1.33
TNFRSF18-201ENST00000328596 MED24O75448 989 aa23.34■■□□□ 1.33
TNFRSF18-201ENST00000328596 DGAT1O75907 488 aa23.34■■□□□ 1.33
TNFRSF18-201ENST00000328596 GATMP50440 423 aa23.34■■□□□ 1.33
TNFRSF18-201ENST00000328596 LAMTOR4Q0VGL1 99 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms