RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 ASNSD1Q9NWL6 643 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 GDAQ9Y2T3 454 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 CAV1Q03135 178 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 CTAGE3PQ8IX95 158 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.28□□□□□ -0.44
COL4A5-201ENST00000328300 NXF1Q9UBU9 619 aaKnown RBP12.28□□□□□ -0.44
COL4A5-201ENST00000328300 SLC8A2Q9UPR5 921 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 ANTXR2P58335 489 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 MAP3K21Q5TCX8 1036 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 STAG2Q8N3U4 1231 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 PIGOQ8TEQ8 1089 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 SEPT1Q8WYJ6 367 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 FAM149B1Q96BN6 582 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 PODXLO00592 558 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 P4HA2O15460 535 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 SRGNP10124 158 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 KCNJ6P48051 423 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 STAT5BP51692 787 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 RUBCNQ92622 972 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 CFAP57Q96MR6 1250 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 POLR3CQ9BUI4 534 aaPredicted RBP12.28□□□□□ -0.44
COL4A5-201ENST00000328300 GOLPH3LQ9H4A5 285 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 CPSF3Q9UKF6 684 aaKnown RBP12.28□□□□□ -0.44
COL4A5-201ENST00000328300 TDP2O95551 362 aa12.27□□□□□ -0.44
COL4A5-201ENST00000328300 ELF1P32519 619 aa12.27□□□□□ -0.44
COL4A5-201ENST00000328300 SLFNL1Q499Z3 407 aa12.27□□□□□ -0.44
COL4A5-201ENST00000328300 LIMA1Q9UHB6 759 aaKnown RBP12.27□□□□□ -0.44
COL4A5-201ENST00000328300 PRCPP42785 496 aa12.27□□□□□ -0.44
COL4A5-201ENST00000328300 ATP11AP98196 1134 aa12.27□□□□□ -0.44
COL4A5-201ENST00000328300 FAM83AQ86UY5 434 aa12.27□□□□□ -0.44
COL4A5-201ENST00000328300 MKNK1Q9BUB5 465 aa12.27□□□□□ -0.44
COL4A5-201ENST00000328300 GRID2IPA4D2P6 1211 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 FAM196BA6NMK8 535 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 RHOBTB3O94955 611 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 CCDC13Q8IYE1 715 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 GMCL1Q96IK5 515 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 KNDC1Q76NI1 1749 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 YWHABP31946 246 aaKnown RBP12.27□□□□□ -0.45
COL4A5-201ENST00000328300 PSMC4P43686 418 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 GPC5P78333 572 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 KCNH2Q12809 1159 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 SHC4Q6S5L8 630 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 NDUFAF2Q8N183 169 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 GGPS1O95749 300 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 CEP85LQ5SZL2 805 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 COL23A1Q86Y22 540 aaPredicted RBP12.27□□□□□ -0.45
COL4A5-201ENST00000328300 MAP2P11137 1827 aaKnown RBP12.27□□□□□ -0.45
COL4A5-201ENST00000328300 ITIH6Q6UXX5 1313 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 SLIT3O75094 1523 aa12.27□□□□□ -0.45
COL4A5-201ENST00000328300 KIF28PB7ZC32 967 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 FOXP2O15409 715 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 LRRN2O75325 713 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 R3HDM1Q15032 1099 aaKnown RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 ANGEL2Q5VTE6 544 aaKnown RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 ANKRD20A3Q5VUR7 823 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 FKBP1CQ5VVH2 108 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 PCGF5Q86SE9 256 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 KCTD6Q8NC69 237 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 MXRA8Q9BRK3 442 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 INTS2Q9H0H0 1204 aaKnown RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 ELP3Q9H9T3 547 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 ABHD10Q9NUJ1 306 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 TJP3O95049 919 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 HOXA10P31260 410 aaPredicted RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 PPARGP37231 505 aaPredicted RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 GTF2A2P52657 109 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 GOLGA8FQ08AF8 430 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 GOLGA8DPQ0D2H9 430 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 ZNF449Q6P9G9 518 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 HAUS6Q7Z4H7 955 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 PLCD3Q8N3E9 789 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 MRIQ9BWK5 157 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 ADARB2Q9NS39 739 aaKnown RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 DDX56Q9NY93 547 aaKnown RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 GGA3Q9NZ52 723 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 ANAPC5Q9UJX4 755 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 ABCC6O95255 1503 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 TNPO2O14787 897 aaKnown RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 SLC16A4O15374 487 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 NR3C2P08235 984 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 PLCB4Q15147 1175 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 ARHGEF18Q6ZSZ5 1173 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 STAP1Q9ULZ2 295 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 RRN3P2A6NIE6 340 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 IFRD2Q12894 506 aaPredicted RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 SRRM1Q8IYB3 904 aaKnown RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 CABS1Q96KC9 395 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 KIF2CQ99661 725 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 TRIM9Q9C026 710 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 FAM49AQ9H0Q0 323 aaPredicted RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 ICAM1P05362 532 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 OAS2P29728 719 aaKnown RBP12.26□□□□□ -0.45
COL4A5-201ENST00000328300 PGBD4Q96DM1 585 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 JMJD4Q9H9V9 463 aa12.26□□□□□ -0.45
COL4A5-201ENST00000328300 SGK1O00141 431 aa12.25□□□□□ -0.45
COL4A5-201ENST00000328300 HIP1RO75146 1068 aa12.25□□□□□ -0.45
COL4A5-201ENST00000328300 IL18RAPO95256 599 aa12.25□□□□□ -0.45
COL4A5-201ENST00000328300 TXNP10599 105 aaKnown RBP12.25□□□□□ -0.45
COL4A5-201ENST00000328300 VSIG1Q86XK7 387 aa12.25□□□□□ -0.45
COL4A5-201ENST00000328300 C17orf53Q8N3J3 647 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms