RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 NUGGCQ68CJ6 796 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 TRIM68Q6AZZ1 485 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 CGB2Q6NT52 195 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 MGARPQ8TDB4 240 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 DYDC1Q8WWB3 177 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 PLCD4Q9BRC7 762 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 ZMYND8Q9ULU4 1186 aaPredicted RBP13.82□□□□□ -0.2
CCDC60-201ENST00000327554 DIS3Q9Y2L1 958 aaKnown RBP13.82□□□□□ -0.2
CCDC60-201ENST00000327554 ABLIM1O14639 778 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 EDIL3O43854 480 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 ADAMTS2O95450 1211 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 CREB1P16220 341 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 PON1P27169 355 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
CCDC60-201ENST00000327554 GALCP54803 685 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 JAM2P57087 298 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 ROR2Q01974 943 aaKnown RBP13.82□□□□□ -0.2
CCDC60-201ENST00000327554 PPATQ06203 517 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 PRPF4BQ13523 1007 aaKnown RBP13.82□□□□□ -0.2
CCDC60-201ENST00000327554 GNPTABQ3T906 1256 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 GRIPAP1Q4V328 841 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 CMPK2Q5EBM0 449 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 VSTM1Q6UX27 236 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 NSUN4Q96CB9 384 aaKnown RBP13.82□□□□□ -0.2
CCDC60-201ENST00000327554 CRNKL1Q9BZJ0 848 aaKnown RBP13.82□□□□□ -0.2
CCDC60-201ENST00000327554 CARD9Q9H257 536 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 RNPEPL1Q9HAU8 725 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 C6orf50Q9HD87 102 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 ATP8A2Q9NTI2 1148 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 MTMR7Q9Y216 660 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 ZBTB1Q9Y2K1 713 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 PCDHA3Q9Y5H8 950 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 NCANO14594 1321 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 PHLPP1O60346 1717 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 ITGB4P16144 1822 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 GPR75-ASB3A0A0A6YYF3 556 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 HIP1RO75146 1068 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 PEX11AO75192 247 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 UNC5CO95185 931 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 NPTXRO95502 500 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 GOLGA8HP0CJ92 632 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 ADAM9Q13443 819 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 SLC4A8Q2Y0W8 1093 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 SUSD4Q5VX71 490 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 U2AF1L4Q8WU68 220 aaKnown RBP13.81□□□□□ -0.2
CCDC60-201ENST00000327554 SCFD1Q8WVM8 642 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
CCDC60-201ENST00000327554 TMEM260Q9NX78 707 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 RTCBQ9Y3I0 505 aaKnown RBP13.81□□□□□ -0.2
CCDC60-201ENST00000327554 ASB3Q9Y575 518 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 TMEM120BA0PK00 339 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 USP17L3A6NCW0 530 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 USP17L4A6NCW7 530 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 ERVV-1B6SEH8 477 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 RTN3O95197 1032 aaPredicted RBP13.81□□□□□ -0.2
CCDC60-201ENST00000327554 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
CCDC60-201ENST00000327554 ATP6V1C1P21283 382 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 CALB2P22676 271 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 MRPS35P82673 323 aaKnown RBP13.81□□□□□ -0.2
CCDC60-201ENST00000327554 ZNF211Q13398 564 aaPredicted RBP13.81□□□□□ -0.2
CCDC60-201ENST00000327554 PDIA5Q14554 519 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 TMEM266Q2M3C6 531 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 USP17L1Q7RTZ2 530 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 CNBD1Q8NA66 436 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 LNX1Q8TBB1 728 aaPredicted RBP13.81□□□□□ -0.2
CCDC60-201ENST00000327554 CKAP2Q8WWK9 683 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 PIGBQ92521 554 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 CRAMP1Q96RY5 1269 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 SYT15Q9BQS2 421 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 PIDD1Q9HB75 910 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 SIX2Q9NPC8 291 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCDC60-201ENST00000327554 BIN2Q9UBW5 565 aaPredicted RBP13.81□□□□□ -0.2
CCDC60-201ENST00000327554 IGSF9BQ9UPX0 1349 aa13.81□□□□□ -0.2
CCDC60-201ENST00000327554 DCCP43146 1447 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 LAMB2P55268 1798 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 SMIM24O75264 130 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 GNA11P29992 359 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 GBP1P32455 592 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 GCLCP48506 637 aaPredicted RBP13.8□□□□□ -0.2
CCDC60-201ENST00000327554 KRT79Q5XKE5 535 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 RNF43Q68DV7 783 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 FAM43BQ6ZT52 329 aaPredicted RBP13.8□□□□□ -0.2
CCDC60-201ENST00000327554 SLC17A8Q8NDX2 589 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 SLC35G2Q8TBE7 412 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 C18orf8Q96DM3 657 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 RAB3IPQ96QF0 476 aaPredicted RBP13.8□□□□□ -0.2
CCDC60-201ENST00000327554 NAP1L3Q99457 506 aaPredicted RBP13.8□□□□□ -0.2
CCDC60-201ENST00000327554 TRIM7Q9C029 511 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 RASAL2Q9UJF2 1139 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 LRRD1A4D1F6 860 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 E7ENQ6 273 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 TDP2O95551 362 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 USP17L8P0C7I0 530 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 RARGP13631 454 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 VCAM1P19320 739 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 MXRA7P84157 204 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 MECOMQ03112 1051 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 CCDC15Q0P6D6 951 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms