RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 VSTM4Q8IW00 320 aa20.72■□□□□ 0.91
EXOSC3-201ENST00000327304 KLHDC9Q8NEP7 349 aa20.72■□□□□ 0.91
EXOSC3-201ENST00000327304 TRAPPC12Q8WVT3 735 aa20.72■□□□□ 0.91
EXOSC3-201ENST00000327304 HPS3Q969F9 1004 aa20.72■□□□□ 0.91
EXOSC3-201ENST00000327304 A0A1B0GTH6 734 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 MSCO60682 206 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 CHMP4BP1P59074 171 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 EHHADHQ08426 723 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 FBXO46Q6PJ61 603 aaPredicted RBP20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 DAW1Q8N136 415 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 CCDC150Q8NCX0 1101 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 KIAA1524Q8TCG1 905 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 PPP1R13LQ8WUF5 828 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 XPNPEP1Q9NQW7 623 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 PDLIM7Q9NR12 457 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 PANK4Q9NVE7 773 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 FRMPD3Q5JV73 1810 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 BICDL2A1A5D9 508 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 FRMD3A2A2Y4 597 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 HIP1RO75146 1068 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 INSRRP14616 1297 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 PSEN2P49810 448 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 SOX10P56693 466 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 STK4Q13043 487 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 COASYQ13057 564 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 MAPK7Q13164 816 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 MFSD10Q14728 455 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 NR1I3Q14994 352 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 KIAA0753Q2KHM9 967 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 HSP90AA4PQ58FG1 418 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 APTXQ7Z2E3 356 aaKnown RBP20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 NOC3LQ8WTT2 800 aaKnown RBP20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 ZHX3Q9H4I2 956 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 GPRC5CQ9NQ84 441 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 INTS13Q9NVM9 706 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 MAPK8IP1Q9UQF2 711 aa20.71■□□□□ 0.91
EXOSC3-201ENST00000327304 LRRC10BA6NIK2 292 aa20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 SFI1A8K8P3 1242 aa20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 HAS3O00219 553 aa20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 TBCAO75347 108 aaKnown RBP20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 DGAT1O75907 488 aa20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 CCNE1P24864 410 aa20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 CST5P28325 142 aaPredicted RBP20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 POLGP54098 1239 aaPredicted RBP20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 EMC2Q15006 297 aa20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 CCSAPQ6IQ19 270 aaPredicted RBP20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 CXCL17Q6UXB2 119 aa20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 CCDC65Q8IXS2 484 aa20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 DHX33Q9H6R0 707 aaKnown RBP20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 ATP6V0A4Q9HBG4 840 aa20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 LIMA1Q9UHB6 759 aaKnown RBP20.7■□□□□ 0.9
EXOSC3-201ENST00000327304 KPNA6O60684 536 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 CCL5P13501 91 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 IGBP1P78318 339 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 LRRC41Q15345 812 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 KCNA10Q16322 511 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 FILIP1LQ4L180 1135 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 ANKRD20A12PQ8NF67 263 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 P2RX5Q93086 422 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 ZBTB10Q96DT7 871 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 MTG1Q9BT17 334 aaPredicted RBP20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 PAK6Q9NQU5 681 aaPredicted RBP20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 ODF2LQ9ULJ1 636 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 ZEB2O60315 1214 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 FAM13AO94988 1023 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 RFC5P40937 340 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 TBC1D8BQ0IIM8 1120 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 LRMPQ12912 555 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 PPFIA1Q13136 1202 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 ZNF484Q5JVG2 852 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 FAM102BQ5T8I3 360 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 TTI2Q6NXR4 508 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 SFR1Q86XK3 245 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 KIAA0895Q8NCT3 520 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 THAP9Q9H5L6 903 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 PYCARDQ9ULZ3 195 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 PPME1Q9Y570 386 aa20.69■□□□□ 0.9
EXOSC3-201ENST00000327304 MAFO75444 373 aaPredicted RBP20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 ASGR1P07306 291 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 SMIM10L2AP0DMW4 78 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 SMIM10L2BP0DMW5 78 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 ZNF131P52739 623 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 GRIK4Q16099 956 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 HERC4Q5GLZ8 1057 aaPredicted RBP20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 FOXR2Q6PJQ5 311 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 RNF180Q86T96 592 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 GUF1Q8N442 669 aaKnown RBP20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 MCPH1Q8NEM0 835 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 SLC7A3Q8WY07 619 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 TIPINQ9BVW5 301 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 TBC1D7Q9P0N9 293 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 COL4A3BPQ9Y5P4 624 aa20.68■□□□□ 0.9
EXOSC3-201ENST00000327304 C22orf31O95567 290 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 PKN2Q16513 984 aaKnown RBP20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 TCP11X2Q5H9J9 407 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 TMEM143Q96AN5 459 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 DEFB118Q96PH6 123 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 KATNAL1Q9BW62 490 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 FGFBP2Q9BYJ0 223 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 RNF208Q9H0X6 261 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms