RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ACCSQ96QU6 501 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 ATP5HO75947 161 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 MYL1P05976 194 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 KDSRQ06136 332 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 MAN2A1Q16706 1144 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 MIS18BP1Q6P0N0 1132 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 LARP4BQ92615 738 aaKnown RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 TGS1Q96RS0 853 aaKnown RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 CCT7Q99832 543 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 SH3GL1Q99961 368 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 C19orf44Q9H6X5 657 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 GREM2Q9H772 168 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 TBC1D23Q9NUY8 699 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 ATP11BQ9Y2G3 1177 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 GRIN2AQ12879 1464 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 NDUFA10O95299 355 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 MAP4P27816 1152 aaKnown RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 MXD4Q14582 209 aaPredicted RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 TAF1BQ53T94 588 aaPredicted RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 DCAF15Q66K64 600 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 TRIML1Q8N9V2 468 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 LZICQ8WZA0 190 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 DHTKD1Q96HY7 919 aaPredicted RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 CDCA7Q9BWT1 371 aaPredicted RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 KLHL11Q9NVR0 708 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 DGKIO75912 1065 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 PIGSQ96S52 555 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 OLFML3Q9NRN5 406 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 STOML1Q9UBI4 398 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 MARCOQ9UEW3 520 aaPredicted RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 GDAQ9Y2T3 454 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 RAD17O75943 681 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 CCND2P30279 289 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 GALNT4Q8N4A0 578 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 SLC7A3Q8WY07 619 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 THAP11Q96EK4 314 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 CEP170P1Q96L14 293 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 CHMP2BQ9UQN3 213 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 PLCG1P19174 1290 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 CNGA3Q16281 694 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 KRT26Q7Z3Y9 468 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 GIPC2Q8TF65 315 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 TSC22D2O75157 780 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 FAM182BQ5T319 152 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 KLHL25Q9H0H3 589 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 DBNDD1Q9H9R9 158 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 PRKAB2O43741 272 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 ADCK5Q3MIX3 580 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 ATXN7L3BQ96GX2 97 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 PNMA2Q9UL42 364 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 GOLGA8RI6L899 631 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 LARGE1O95461 756 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 DLGAP3O95886 979 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 PDIA3P30101 505 aaKnown RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 HDAC4P56524 1084 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 YEATS2Q9ULM3 1422 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 PPEF1O14829 653 aaPredicted RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 ALDH1B1P30837 517 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 NR5A1Q13285 461 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 BZW1Q7L1Q6 419 aaKnown RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 LSG1Q9H089 658 aaKnown RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 FAM95CA0A1B0GW59 222 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 STXBP3O00186 592 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 PSMC2P35998 433 aaKnown RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 MKRN4PQ13434 485 aaPredicted RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 DMC1Q14565 340 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 ZNF589Q86UQ0 364 aaPredicted RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 STAG2Q8N3U4 1231 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 EAF2Q96CJ1 260 aaPredicted RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 ZNF668Q96K58 619 aaPredicted RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 DLGAP2Q9P1A6 1054 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 KCNG1Q9UIX4 513 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 ABT1Q9ULW3 272 aaKnown RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 KIF1CO43896 1103 aaKnown RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 ADCY3O60266 1144 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 VSNL1P62760 191 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 LBRQ14739 615 aaKnown RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 CENPUQ71F23 418 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 SIKE1Q9BRV8 207 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 MSTO1Q9BUK6 570 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 PCDHB6Q9Y5E3 794 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 SFI1A8K8P3 1242 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 MYL3P08590 195 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 SYCP2LQ5T4T6 812 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 GCNAQ96QF7 691 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.42□□□□□ -1.06
CIITA-201ENST00000324288 IQANK1A0A1B0GTG1 560 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 GPS1Q13098 491 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 DTNBP1Q96EV8 351 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 WDR24Q96S15 920 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 NGRNQ9NPE2 291 aaKnown RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.42□□□□□ -1.06
CIITA-201ENST00000324288 CFAP73A6NFT4 308 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 FGFR4P22455 802 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 EMBQ6PCB8 327 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 ANKMY2Q8IV38 441 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 ARHGAP18Q8N392 663 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 USP17L8P0C7I0 530 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 PGM1P36871 562 aa8.42□□□□□ -1.06
CIITA-201ENST00000324288 ARL4CP56559 192 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms