RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 BANK1Q8NDB2 785 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 TPCN2Q8NHX9 752 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 ZBED3Q96IU2 234 aaPredicted RBP24.35■■□□□ 1.49
PNKP-201ENST00000322344 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.35■■□□□ 1.49
PNKP-201ENST00000322344 TMEM59LQ9UK28 342 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 DBR1Q9UK59 544 aaKnown RBP24.35■■□□□ 1.49
PNKP-201ENST00000322344 PACSIN2Q9UNF0 486 aaPredicted RBP24.35■■□□□ 1.49
PNKP-201ENST00000322344 WDR46O15213 610 aaKnown RBP24.35■■□□□ 1.49
PNKP-201ENST00000322344 OPA1O60313 960 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 HEXIM1O94992 359 aaKnown RBP24.35■■□□□ 1.49
PNKP-201ENST00000322344 RXRBP28702 533 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 DNA2P51530 1060 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 GJB7Q6PEY0 223 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 PADI6Q6TGC4 694 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 CDAN1Q8IWY9 1227 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 SYCP3Q8IZU3 236 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 PRPF38AQ8NAV1 312 aaKnown RBP24.35■■□□□ 1.49
PNKP-201ENST00000322344 ACTRT1Q8TDG2 376 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 TMEM174Q8WUU8 243 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 AGBL1Q96MI9 1066 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 GLIS2Q9BZE0 524 aaPredicted RBP24.35■■□□□ 1.49
PNKP-201ENST00000322344 TMEM206Q9H813 350 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 MAP3K20Q9NYL2 800 aaKnown RBP24.35■■□□□ 1.49
PNKP-201ENST00000322344 DNAJC12Q9UKB3 198 aa24.35■■□□□ 1.49
PNKP-201ENST00000322344 ZNF536O15090 1300 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 GOLGA8KD6RF30 607 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 KCNK3O14649 394 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 EVI5O60447 810 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 SLFN11Q7Z7L1 901 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 KSR1Q8IVT5 923 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 NIM1KQ8IY84 436 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 SLC30A5Q8TAD4 765 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 LPAR1Q92633 364 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 ZBTB9Q96C00 473 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 INTS2Q9H0H0 1204 aaKnown RBP24.34■■□□□ 1.49
PNKP-201ENST00000322344 IKZF4Q9H2S9 585 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 KCNH7Q9NS40 1196 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 LARSQ9P2J5 1176 aaKnown RBP24.34■■□□□ 1.49
PNKP-201ENST00000322344 COL4A5P29400 1685 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 IVLP07476 585 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 INPP5BP32019 993 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 MYL7Q01449 175 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 DAW1Q8N136 415 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 U2AF1L4Q8WU68 220 aaKnown RBP24.34■■□□□ 1.49
PNKP-201ENST00000322344 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.34■■□□□ 1.49
PNKP-201ENST00000322344 VTI1AQ96AJ9 217 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 ZFP91Q96JP5 570 aaPredicted RBP24.34■■□□□ 1.49
PNKP-201ENST00000322344 CALR3Q96L12 384 aaKnown RBP24.34■■□□□ 1.49
PNKP-201ENST00000322344 KRT12Q99456 494 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 HINFPQ9BQA5 517 aa24.34■■□□□ 1.49
PNKP-201ENST00000322344 EXOC3O60645 756 aa24.33■■□□□ 1.49
PNKP-201ENST00000322344 GLI1P08151 1106 aa24.33■■□□□ 1.49
PNKP-201ENST00000322344 MRPS25P82663 173 aaKnown RBP24.33■■□□□ 1.49
PNKP-201ENST00000322344 BFSP1Q12934 665 aa24.33■■□□□ 1.49
PNKP-201ENST00000322344 DRAP1Q14919 205 aaPredicted RBP24.33■■□□□ 1.49
PNKP-201ENST00000322344 CLEC4DQ8WXI8 215 aa24.33■■□□□ 1.49
PNKP-201ENST00000322344 HOOK2Q96ED9 719 aa24.33■■□□□ 1.49
PNKP-201ENST00000322344 SH3GL2Q99962 352 aa24.33■■□□□ 1.49
PNKP-201ENST00000322344 ZNF341Q9BYN7 854 aa24.33■■□□□ 1.49
PNKP-201ENST00000322344 SUCLA2Q9P2R7 463 aaPredicted RBP24.33■■□□□ 1.49
PNKP-201ENST00000322344 APEX2Q9UBZ4 518 aa24.33■■□□□ 1.49
PNKP-201ENST00000322344 UBIAD1Q9Y5Z9 338 aa24.33■■□□□ 1.49
PNKP-201ENST00000322344 HSF2BPO75031 334 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 KRT13P13646 458 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 PCNX4Q63HM2 1172 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 EIF1ADQ8N9N8 165 aaKnown RBP24.32■■□□□ 1.48
PNKP-201ENST00000322344 EPB41L5Q9HCM4 733 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 GINM1Q9NU53 330 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 K7ENM7 598 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 DDX39AO00148 427 aaKnown RBP24.32■■□□□ 1.48
PNKP-201ENST00000322344 LYPLA2O95372 231 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 GUCY2DQ02846 1103 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 CBWD6Q4V339 395 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 CBWD3Q5JTY5 395 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 CBWD5Q5RIA9 395 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 PEX26Q7Z412 305 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 C12orf56Q8IXR9 622 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 FAM76AQ8TAV0 307 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 LNX1Q8TBB1 728 aaPredicted RBP24.32■■□□□ 1.48
PNKP-201ENST00000322344 RIN2Q8WYP3 895 aaPredicted RBP24.32■■□□□ 1.48
PNKP-201ENST00000322344 CAMKK2Q96RR4 588 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 RUFY1Q96T51 708 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 TIPINQ9BVW5 301 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 AGO4Q9HCK5 861 aaKnown RBP24.32■■□□□ 1.48
PNKP-201ENST00000322344 COL20A1Q9P218 1284 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 PNMA2Q9UL42 364 aa24.32■■□□□ 1.48
PNKP-201ENST00000322344 NCANO14594 1321 aa24.31■■□□□ 1.48
PNKP-201ENST00000322344 DHX15O43143 795 aaKnown RBP24.31■■□□□ 1.48
PNKP-201ENST00000322344 TMEM253P0C7T8 217 aa24.31■■□□□ 1.48
PNKP-201ENST00000322344 PPFIA1Q13136 1202 aa24.31■■□□□ 1.48
PNKP-201ENST00000322344 TKFCQ3LXA3 575 aa24.31■■□□□ 1.48
PNKP-201ENST00000322344 INTS8Q75QN2 995 aaKnown RBP24.31■■□□□ 1.48
PNKP-201ENST00000322344 SCFD2Q8WU76 684 aa24.31■■□□□ 1.48
PNKP-201ENST00000322344 ACCSQ96QU6 501 aa24.31■■□□□ 1.48
PNKP-201ENST00000322344 STXBP5LQ9Y2K9 1186 aa24.31■■□□□ 1.48
PNKP-201ENST00000322344 GOLGA6CA6NDK9 693 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 NFIBO00712 420 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 P4HA2O15460 535 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 GOLGA6DP0CG33 693 aa24.3■■□□□ 1.48
PNKP-201ENST00000322344 TRIM49P0CI25 452 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms