RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 NSUN6Q8TEA1 469 aaKnown RBP8.28□□□□□ -1.08
IFT88-201ENST00000319980 HOXC10Q9NYD6 342 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 ADAMTS5Q9UNA0 930 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 AFG3L2Q9Y4W6 797 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 TISP43B9A030 160 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 ZNF185O15231 689 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 SORBS3O60504 671 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 PPP1R37O75864 691 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 LYPLA2O95372 231 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 JAK3P52333 1124 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 OAZ1P54368 228 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 PEX3P56589 373 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 PTK2Q05397 1052 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 SLC18A3Q16572 532 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 DHX37Q8IY37 1157 aaKnown RBP8.28□□□□□ -1.08
IFT88-201ENST00000319980 NOA1Q8NC60 698 aaKnown RBP8.28□□□□□ -1.08
IFT88-201ENST00000319980 MKNK1Q9BUB5 465 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 PCIF1Q9H4Z3 704 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 A1CFQ9NQ94 594 aaKnown RBP8.28□□□□□ -1.08
IFT88-201ENST00000319980 WDR70Q9NW82 654 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 JRKLQ9Y4A0 524 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 SCN4AP35499 1836 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 ANO9A1A5B4 782 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 RBAK-RBAKDNI3L0D1 243 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 PEX10O60683 326 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 USP2O75604 605 aaPredicted RBP8.27□□□□□ -1.09
IFT88-201ENST00000319980 RGS20O76081 388 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 TRIM49P0CI25 452 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 TRIM49CP0CI26 452 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 PLS3P13797 630 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 SFNP31947 248 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 NFIL3Q16649 462 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 FAM102BQ5T8I3 360 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 HAUS6Q7Z4H7 955 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 IRF2BP2Q7Z5L9 587 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.27□□□□□ -1.09
IFT88-201ENST00000319980 GOLGA5Q8TBA6 731 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 RBM46Q8TBY0 533 aaKnown RBP8.27□□□□□ -1.09
IFT88-201ENST00000319980 INPP4AQ96PE3 977 aaPredicted RBP8.27□□□□□ -1.09
IFT88-201ENST00000319980 MMS19Q96T76 1030 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 PSMB7Q99436 277 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 STRA6Q9BX79 667 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 ACAD9Q9H845 621 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 ANKZF1Q9H8Y5 726 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 DMAC2Q9NW81 257 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 CYP39A1Q9NYL5 469 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 PCDHA10Q9Y5I2 948 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 PPP2R3BQ9Y5P8 575 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 UBE4BO95155 1302 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 SPDYE16A6NNV3 312 aaPredicted RBP8.27□□□□□ -1.09
IFT88-201ENST00000319980 SLC16A4O15374 487 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 MAFGO15525 162 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 PNMA6AP0CW24 399 aaPredicted RBP8.27□□□□□ -1.09
IFT88-201ENST00000319980 FMO5P49326 533 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 VGLL4Q14135 290 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 BMS1Q14692 1282 aaKnown RBP8.27□□□□□ -1.09
IFT88-201ENST00000319980 KIAA0753Q2KHM9 967 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 CBWD6Q4V339 395 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 CBWD3Q5JTY5 395 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 CBWD5Q5RIA9 395 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 XRRA1Q6P2D8 792 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 ANO5Q75V66 913 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 GPRASP2Q96D09 838 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 ALS2CR12Q96Q35 445 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 MOV10L1Q9BXT6 1211 aaKnown RBP8.27□□□□□ -1.09
IFT88-201ENST00000319980 TMEM206Q9H813 350 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 ARFGAP3Q9NP61 516 aa8.27□□□□□ -1.09
IFT88-201ENST00000319980 LUC7LQ9NQ29 371 aaKnown RBP8.27□□□□□ -1.09
IFT88-201ENST00000319980 ATAD5Q96QE3 1844 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 PJA2O43164 708 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 ZRANB2O95218 330 aaKnown RBP eCLIP8.26□□□□□ -1.09
IFT88-201ENST00000319980 TUBB4BP68371 445 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 SWSAP1Q6NVH7 229 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 CC2D1AQ6P1N0 951 aaPredicted RBP8.26□□□□□ -1.09
IFT88-201ENST00000319980 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.26□□□□□ -1.09
IFT88-201ENST00000319980 ZNF571Q7Z3V5 609 aaPredicted RBP8.26□□□□□ -1.09
IFT88-201ENST00000319980 TXLNBQ8N3L3 684 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 CAGE1Q8TC20 777 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 NOX5Q96PH1 765 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 PNKPQ96T60 521 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 CBWD1Q9BRT8 395 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 PACSIN1Q9BY11 444 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 SIX2Q9NPC8 291 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 GABBR1Q9UBS5 961 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 AJAP1Q9UKB5 411 aaPredicted RBP8.26□□□□□ -1.09
IFT88-201ENST00000319980 TELO2Q9Y4R8 837 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 GTPBP10A4D1E9 387 aaKnown RBP8.26□□□□□ -1.09
IFT88-201ENST00000319980 CCDC169A6NNP5 214 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 ATP2A1O14983 1001 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 KLRC1P26715 233 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 CXCR5P32302 372 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 BFSP1Q12934 665 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 IQCEQ6IPM2 695 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 ZNF746Q6NUN9 644 aaPredicted RBP8.26□□□□□ -1.09
IFT88-201ENST00000319980 ACCSQ96QU6 501 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 KIFC3Q9BVG8 833 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 TRAIPQ9BWF2 469 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 CCDC151A5D8V7 595 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 ZNF862O60290 1169 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 KCNA2P16389 499 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms