RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 DMP1Q13316 513 aaPredicted RBP30.32■■■□□ 2.44
CTDNEP1-201ENST00000318988 METTL13Q8N6R0 699 aa30.32■■■□□ 2.44
CTDNEP1-201ENST00000318988 MAPK8IP1Q9UQF2 711 aa30.32■■■□□ 2.44
CTDNEP1-201ENST00000318988 PRCPP42785 496 aa30.31■■■□□ 2.44
CTDNEP1-201ENST00000318988 SMTNP53814 917 aa30.31■■■□□ 2.44
CTDNEP1-201ENST00000318988 SOX10P56693 466 aa30.31■■■□□ 2.44
CTDNEP1-201ENST00000318988 RTP1P59025 263 aa30.31■■■□□ 2.44
CTDNEP1-201ENST00000318988 IER5Q5VY09 327 aa30.31■■■□□ 2.44
CTDNEP1-201ENST00000318988 KLHL10Q6JEL2 608 aa30.31■■■□□ 2.44
CTDNEP1-201ENST00000318988 GAS2L3Q86XJ1 694 aa30.31■■■□□ 2.44
CTDNEP1-201ENST00000318988 SLC17A8Q8NDX2 589 aa30.31■■■□□ 2.44
CTDNEP1-201ENST00000318988 SETD4Q9NVD3 440 aa30.31■■■□□ 2.44
CTDNEP1-201ENST00000318988 PSMA7O14818 248 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 CABYRO75952 493 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 C22orf31O95567 290 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 GNAT1P11488 350 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 TMOD1P28289 359 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 PEX3P56589 373 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 GSE1Q14687 1217 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 MTFR1Q15390 333 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 EFCAB12Q6NXP0 572 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 KIAA0895Q8NCT3 520 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 FAM200AQ8TCP9 573 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 VTI1AQ96AJ9 217 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 TSEN34Q9BSV6 310 aaKnown RBP30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 PCDHA2Q9Y5H9 948 aa30.3■■■□□ 2.44
CTDNEP1-201ENST00000318988 CCDC169A6NNP5 214 aa30.29■■■□□ 2.44
CTDNEP1-201ENST00000318988 GCNT3O95395 438 aa30.29■■■□□ 2.44
CTDNEP1-201ENST00000318988 PPP2R5AQ15172 486 aa30.29■■■□□ 2.44
CTDNEP1-201ENST00000318988 CCSAPQ6IQ19 270 aaPredicted RBP30.29■■■□□ 2.44
CTDNEP1-201ENST00000318988 MYOCDQ8IZQ8 938 aa30.29■■■□□ 2.44
CTDNEP1-201ENST00000318988 LRRC71Q8N4P6 559 aa30.29■■■□□ 2.44
CTDNEP1-201ENST00000318988 PSPC1Q8WXF1 523 aaKnown RBP30.29■■■□□ 2.44
CTDNEP1-201ENST00000318988 PAK6Q9NQU5 681 aaPredicted RBP30.29■■■□□ 2.44
CTDNEP1-201ENST00000318988 IGKV6-21A0A0C4DH24 114 aa30.28■■■□□ 2.44
CTDNEP1-201ENST00000318988 MOXD2PA6NHM9 499 aa30.28■■■□□ 2.44
CTDNEP1-201ENST00000318988 PPP1R3GB7ZBB8 358 aa30.28■■■□□ 2.44
CTDNEP1-201ENST00000318988 KBTBD13C9JR72 458 aa30.28■■■□□ 2.44
CTDNEP1-201ENST00000318988 MAPTP10636 758 aaKnown RBP30.28■■■□□ 2.44
CTDNEP1-201ENST00000318988 COBLL1Q53SF7 1204 aa30.28■■■□□ 2.44
CTDNEP1-201ENST00000318988 MTHFD1LQ6UB35 978 aa30.28■■■□□ 2.44
CTDNEP1-201ENST00000318988 ADSSL1Q8N142 457 aa30.28■■■□□ 2.44
CTDNEP1-201ENST00000318988 RNF214Q8ND24 703 aa30.28■■■□□ 2.44
CTDNEP1-201ENST00000318988 DEFB118Q96PH6 123 aa30.28■■■□□ 2.44
CTDNEP1-201ENST00000318988 BPIFA3Q9BQP9 254 aa30.28■■■□□ 2.44
CTDNEP1-201ENST00000318988 C17orf102A2RUQ5 167 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 BECN2A8MW95 431 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 K7ENM7 598 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 CD44P16070 742 aaKnown RBP30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 ERCC5P28715 1186 aaPredicted RBP30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 ARL2P36404 184 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 ACLYP53396 1101 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 GUF1Q8N442 669 aaKnown RBP30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 LMBR1Q8WVP7 490 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 DHTKD1Q96HY7 919 aaPredicted RBP30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 KMT5AQ9NQR1 393 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 SUCLA2Q9P2R7 463 aaPredicted RBP30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 CTNND2Q9UQB3 1225 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 PCDHB13Q9Y5F0 798 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 GOLGA6L3A6NEY3 463 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 NMT1P30419 496 aaKnown RBP30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 PAK1Q13153 545 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 MXD4Q14582 209 aaPredicted RBP30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 NBPF20Q3BBV1 942 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 NFRKBQ6P4R8 1299 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 CBX8Q9HC52 389 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 HDAC6Q9UBN7 1215 aa30.27■■■□□ 2.44
CTDNEP1-201ENST00000318988 ALCAMQ13740 583 aa30.26■■■□□ 2.43
CTDNEP1-201ENST00000318988 FAM47CQ5HY64 1035 aa30.26■■■□□ 2.43
CTDNEP1-201ENST00000318988 ZNF720Q7Z2F6 126 aa30.26■■■□□ 2.43
CTDNEP1-201ENST00000318988 SPIRE2Q8WWL2 714 aa30.26■■■□□ 2.43
CTDNEP1-201ENST00000318988 PRPF31Q8WWY3 499 aaKnown RBP30.26■■■□□ 2.43
CTDNEP1-201ENST00000318988 NELFBQ8WX92 580 aa30.26■■■□□ 2.43
CTDNEP1-201ENST00000318988 GLT1D1Q96MS3 346 aa30.26■■■□□ 2.43
CTDNEP1-201ENST00000318988 SMTNL1A8MU46 457 aa30.25■■■□□ 2.43
CTDNEP1-201ENST00000318988 H0YCG3 227 aa30.25■■■□□ 2.43
CTDNEP1-201ENST00000318988 MYBP10242 640 aa30.25■■■□□ 2.43
CTDNEP1-201ENST00000318988 NPTX2P47972 431 aa30.25■■■□□ 2.43
CTDNEP1-201ENST00000318988 CLCN3P51790 818 aa30.25■■■□□ 2.43
CTDNEP1-201ENST00000318988 PPP1R13LQ8WUF5 828 aa30.25■■■□□ 2.43
CTDNEP1-201ENST00000318988 MAP7D2Q96T17 732 aa30.25■■■□□ 2.43
CTDNEP1-201ENST00000318988 RBSNQ9H1K0 784 aa30.25■■■□□ 2.43
CTDNEP1-201ENST00000318988 HTTP42858 3142 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 EIF3DO15371 548 aaKnown RBP eCLIP30.24■■■□□ 2.433e-16■□□□□ 8.3
CTDNEP1-201ENST00000318988 ASAP2O43150 1006 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 GLRA2P23416 452 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 NAMPTP43490 491 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 MARCH8Q5T0T0 291 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 AOPEPQ8N6M6 819 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 GLIS3Q8NEA6 775 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 DEPTORQ8TB45 409 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 ASAP3Q8TDY4 903 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 BSNDQ8WZ55 320 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 ZNF333Q96JL9 665 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 FGFBP2Q9BYJ0 223 aa30.24■■■□□ 2.43
CTDNEP1-201ENST00000318988 BICDL2A1A5D9 508 aa30.23■■■□□ 2.43
CTDNEP1-201ENST00000318988 LRRIQ4A6NIV6 560 aa30.23■■■□□ 2.43
CTDNEP1-201ENST00000318988 GOLGA6L19H0YKK7 550 aa30.23■■■□□ 2.43
CTDNEP1-201ENST00000318988 SLC16A4O15374 487 aa30.23■■■□□ 2.43
CTDNEP1-201ENST00000318988 ABCD1P33897 745 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms