RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 EYA4O95677 639 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 GAP43P17677 238 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 CDR1P51861 262 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 DRG2P55039 364 aaKnown RBP20.72■□□□□ 0.91
RTN4-201ENST00000317610 CLUL1Q15846 466 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 SLC15A2Q16348 729 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 DCAF4Q8WV16 495 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 XPO6Q96QU8 1125 aaKnown RBP20.72■□□□□ 0.91
RTN4-201ENST00000317610 ERP44Q9BS26 406 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 FAM129AQ9BZQ8 928 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 VAV3Q9UKW4 847 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 PCDHB13Q9Y5F0 798 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 IGSF9BQ9UPX0 1349 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 GHRP10912 638 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 DR1Q01658 176 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 KCNA1Q09470 495 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 GLYCTKQ8IVS8 523 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 MKL1Q969V6 931 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 TACO1Q9BSH4 297 aaKnown RBP20.72■□□□□ 0.91
RTN4-201ENST00000317610 MKNK1Q9BUB5 465 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 GPR88Q9GZN0 384 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 CD248Q9HCU0 757 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 ATP8A1Q9Y2Q0 1164 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 LRRC37AA6NMS7 1700 aa20.72■□□□□ 0.91
RTN4-201ENST00000317610 CIITAP33076 1130 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 PSMC2P35998 433 aaKnown RBP20.71■□□□□ 0.91
RTN4-201ENST00000317610 MAP2K2P36507 400 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 SREBF1P36956 1147 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 GTF2IP78347 998 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 KLRC3Q07444 240 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 IFFO1Q0D2I5 559 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 DHX34Q14147 1143 aaKnown RBP20.71■□□□□ 0.91
RTN4-201ENST00000317610 TRAPPC3LQ5T215 181 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 FMNL3Q8IVF7 1028 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 FAM186BQ8IYM0 893 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 FUKQ8N0W3 1084 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 CTNNBL1Q8WYA6 563 aaPredicted RBP20.71■□□□□ 0.91
RTN4-201ENST00000317610 CCT6BQ92526 530 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 PGM2Q96G03 612 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 RBM17Q96I25 401 aaKnown RBP20.71■□□□□ 0.91
RTN4-201ENST00000317610 CCDC17Q96LX7 622 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 BHMT2Q9H2M3 363 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 KDM4CQ9H3R0 1056 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.71■□□□□ 0.91
RTN4-201ENST00000317610 DAAM1Q9Y4D1 1078 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 LY75O60449 1722 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 GOLGA6L10A0A0M3HER8 536 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 FAM86B1E9PN63 330 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 F8W031 263 aaPredicted RBP20.71■□□□□ 0.91
RTN4-201ENST00000317610 MPHOSPH10O00566 681 aaKnown RBP20.71■□□□□ 0.91
RTN4-201ENST00000317610 BBOX1O75936 387 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 FAM86B2P0C5J1 330 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 SCTRP47872 440 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 DRAP1Q14919 205 aaPredicted RBP20.71■□□□□ 0.91
RTN4-201ENST00000317610 KCTD19Q17RG1 926 aaPredicted RBP20.71■□□□□ 0.91
RTN4-201ENST00000317610 CHMP6Q96FZ7 201 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 JPH2Q9BR39 696 aaPredicted RBP20.71■□□□□ 0.91
RTN4-201ENST00000317610 PABPC3Q9H361 631 aaKnown RBP20.71■□□□□ 0.91
RTN4-201ENST00000317610 BCAS3Q9H6U6 928 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 DNAJC12Q9UKB3 198 aa20.71■□□□□ 0.91
RTN4-201ENST00000317610 CAND2O75155 1236 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 FMO5P49326 533 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 MMP14P50281 582 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 PREPLQ4J6C6 727 aaPredicted RBP20.7■□□□□ 0.9
RTN4-201ENST00000317610 PHF20L1A8MW92 1017 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 HADHBP55084 474 aaKnown RBP20.7■□□□□ 0.9
RTN4-201ENST00000317610 XRCC4Q13426 336 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 CYB5D1Q6P9G0 228 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 ZDHHC24Q6UX98 284 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 CPLX4Q7Z7G2 160 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 MAGEC3Q8TD91 643 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 SGSM3Q96HU1 749 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 ZNF317Q96PQ6 595 aaPredicted RBP20.7■□□□□ 0.9
RTN4-201ENST00000317610 TRIM31Q9BZY9 425 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 ERVK-5Q9HDB9 667 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 USP40Q9NVE5 1235 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 RABGAP1Q9Y3P9 1069 aa20.7■□□□□ 0.9
RTN4-201ENST00000317610 BACH1O14867 736 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 MSH4O15457 936 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 PPP1R12BO60237 982 aaPredicted RBP20.69■□□□□ 0.9
RTN4-201ENST00000317610 DNAJC8O75937 253 aaPredicted RBP20.69■□□□□ 0.9
RTN4-201ENST00000317610 FOSP01100 380 aaPredicted RBP20.69■□□□□ 0.9
RTN4-201ENST00000317610 HLA-DOAP06340 250 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 PMS2P54278 862 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 PPARDQ03181 441 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 WLSQ5T9L3 541 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 RINT1Q6NUQ1 792 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 CCDC50Q8IVM0 306 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 NEK9Q8TD19 979 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 ARHGEF26Q96DR7 871 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 PNMA2Q9UL42 364 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 KIAA0391O15091 583 aaKnown RBP20.69■□□□□ 0.9
RTN4-201ENST00000317610 SHBGP04278 402 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 CCDC172P0C7W6 258 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 VCAM1P19320 739 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 MMP13P45452 471 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 KIAA1755Q5JYT7 1200 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 JAMLQ86YT9 394 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 PARP9Q8IXQ6 854 aa20.69■□□□□ 0.9
RTN4-201ENST00000317610 EIF2AK1Q9BQI3 630 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms