RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PAPOLBQ9NRJ5 636 aaKnown RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ETAA1Q9NY74 926 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 NENFQ9UMX5 172 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 CAND2O75155 1236 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ZPR1O75312 459 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TBCAO75347 108 aaKnown RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 SMNDC1O75940 238 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ITGA4P13612 1032 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 KRT13P13646 458 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ITIH2P19823 946 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TNFAIP8L3Q5GJ75 292 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 HS2ST1Q7LGA3 356 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ARHGAP24Q8N264 748 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 MDM1Q8TC05 714 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 GRK7Q8WTQ7 553 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 CKAP2Q8WWK9 683 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 UBN1Q9NPG3 1134 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 OPLAHO14841 1288 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 ECEL1O95672 775 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 GCLCP48506 637 aaPredicted RBP5.15□□□□□ -1.58
PTPN13-201ENST00000316707 IFNAR2P48551 515 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 PAPOLAP51003 745 aaKnown RBP5.15□□□□□ -1.58
PTPN13-201ENST00000316707 PLS1Q14651 629 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 MOXD1Q6UVY6 613 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 SLC35C1Q96A29 364 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 PACSIN1Q9BY11 444 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 STK33Q9BYT3 514 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 FGFR1OP2Q9NVK5 253 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 ZBTB1Q9Y2K1 713 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 CAMTA1Q9Y6Y1 1673 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 CYP2D7A0A087X1C5 515 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 GAP43P17677 238 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 ATP6V1C1P21283 382 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 SLC18A1P54219 525 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 LRRC41Q15345 812 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 PHLDB3Q6NSJ2 640 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 ADGRA1Q86SQ6 560 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 DZIP1Q86YF9 867 aaKnown RBP5.15□□□□□ -1.58
PTPN13-201ENST00000316707 SPDYE1Q8NFV5 336 aaPredicted RBP5.15□□□□□ -1.58
PTPN13-201ENST00000316707 PIGOQ8TEQ8 1089 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 STK32AQ8WU08 396 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 PDP2Q9P2J9 529 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 TRAFD1O14545 582 aaPredicted RBP5.15□□□□□ -1.58
PTPN13-201ENST00000316707 SMIM24O75264 130 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 RARAP10276 462 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 PEX19P40855 299 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 DYNLL1P63167 89 aaKnown RBP5.15□□□□□ -1.58
PTPN13-201ENST00000316707 STAT4Q14765 748 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 SF3B3Q15393 1217 aaKnown RBP5.15□□□□□ -1.58
PTPN13-201ENST00000316707 BMT2Q1RMZ1 405 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 SPRED3Q2MJR0 410 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 FBXO33Q7Z6M2 555 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 CCDC105Q8IYK2 499 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 SYNE4Q8N205 404 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 WDR66Q8TBY9 1149 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 ZNF398Q8TD17 642 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 DHX36Q9H2U1 1008 aaKnown RBP5.15□□□□□ -1.58
PTPN13-201ENST00000316707 DCLRE1BQ9H816 532 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 SCOCQ9UIL1 159 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 LRCH1Q9Y2L9 728 aa5.15□□□□□ -1.58
PTPN13-201ENST00000316707 TIAM2Q8IVF5 1701 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 TBX3O15119 743 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 MAPK13O15264 365 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 ZBTB48P10074 688 aaPredicted RBP5.15□□□□□ -1.59
PTPN13-201ENST00000316707 HIBADHP31937 336 aaKnown RBP5.15□□□□□ -1.59
PTPN13-201ENST00000316707 CETN2P41208 172 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 CCNHP51946 323 aaPredicted RBP5.15□□□□□ -1.59
PTPN13-201ENST00000316707 MYBPC2Q14324 1141 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 ASPRV1Q53RT3 343 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 SLCO2A1Q92959 643 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 TRIM51Q9BSJ1 452 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 PCDHA12Q9UN75 941 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 SMG5Q9UPR3 1016 aaKnown RBP5.15□□□□□ -1.59
PTPN13-201ENST00000316707 TMEM120BA0PK00 339 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 CCNB1P14635 433 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 OCRLQ01968 901 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 KNOP1Q1ED39 458 aaKnown RBP5.15□□□□□ -1.59
PTPN13-201ENST00000316707 CLEC4GQ6UXB4 293 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 ASRGL1Q7L266 308 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 GPBP1Q86WP2 473 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 PIGBQ92521 554 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 MAGEB18Q96M61 343 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 TRAPPC9Q96Q05 1148 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 PAIP2Q9BPZ3 127 aaKnown RBP5.15□□□□□ -1.59
PTPN13-201ENST00000316707 ADAM22Q9P0K1 906 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 FRMD3A2A2Y4 597 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 BRAFP15056 766 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 PECAM1P16284 738 aaPredicted RBP5.15□□□□□ -1.59
PTPN13-201ENST00000316707 TNNI2P48788 182 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 PPP4CP60510 307 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 MXRA7P84157 204 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 PPATQ06203 517 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 MTFR1Q15390 333 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 CCDC6Q16204 474 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 SLC15A2Q16348 729 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 BARGINQ6ZT62 677 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.15□□□□□ -1.59
PTPN13-201ENST00000316707 SLFN12Q8IYM2 578 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 DNAJC9Q8WXX5 260 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 FAM81BQ96LP2 452 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms