RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 PTPROQ16827 1216 aa11.6□□□□□ -0.55
HNF4A-201ENST00000316099 CCDC88AQ3V6T2 1871 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 MYH2Q9UKX2 1941 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 CICQ96RK0 1608 aaPredicted RBP11.59□□□□□ -0.55
HNF4A-201ENST00000316099 EIF4A3P38919 411 aaKnown RBP11.59□□□□□ -0.55
HNF4A-201ENST00000316099 GARSP41250 739 aaKnown RBP11.59□□□□□ -0.55
HNF4A-201ENST00000316099 SLC12A2P55011 1212 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 PLTPP55058 493 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 NAA35Q5VZE5 725 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 PDCD7Q8N8D1 485 aaKnown RBP11.59□□□□□ -0.55
HNF4A-201ENST00000316099 PRR12Q9ULL5 1215 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 PLAAQ9Y263 795 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 TRIM49BA6NDI0 452 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 PPFIA2O75334 1257 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 ATP5HO75947 161 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 ECE1P42892 770 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 ANKRD7Q92527 254 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 CAMKK2Q96RR4 588 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 RASGRF2O14827 1237 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 GGCXP38435 758 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 KIF11P52732 1056 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 MYL7Q01449 175 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 CXCL9Q07325 125 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 RAD54LQ92698 747 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 RIOX1Q9H6W3 641 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 C1orf112Q9NSG2 853 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 MRFAP1Q9Y605 127 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 DUOX1Q9NRD9 1551 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 CCDC188H7C350 402 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 CYP2C19P33261 490 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 VPS41P49754 854 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 NLRX1Q86UT6 975 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 SAAL1Q96ER3 474 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 FMO2Q99518 471 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 IDI2Q9BXS1 227 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 PTPN22Q9Y2R2 807 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 ZHX2Q9Y6X8 837 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 CCNE1P24864 410 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 FMR1Q06787 632 aaKnown RBP eCLIP11.59□□□□□ -0.55
HNF4A-201ENST00000316099 HAUS8Q9BT25 410 aa11.59□□□□□ -0.55
HNF4A-201ENST00000316099 SCN7AQ01118 1682 aa11.58□□□□□ -0.55
HNF4A-201ENST00000316099 SPP2Q13103 211 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 PRAMEF18Q5VWM3 479 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 APOBEC3FQ8IUX4 373 aaKnown RBP11.58□□□□□ -0.56
HNF4A-201ENST00000316099 AKAP11Q9UKA4 1901 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 FTCDO95954 541 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 P4HA1P13674 534 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 POLE2P56282 527 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 ST13P4Q8IZP2 240 aaPredicted RBP11.58□□□□□ -0.56
HNF4A-201ENST00000316099 PROCA1Q8NCQ7 364 aaPredicted RBP11.58□□□□□ -0.56
HNF4A-201ENST00000316099 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.58□□□□□ -0.56
HNF4A-201ENST00000316099 MAPK13O15264 365 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 DCTN3O75935 186 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 DNAJC8O75937 253 aaPredicted RBP11.58□□□□□ -0.56
HNF4A-201ENST00000316099 INHBAP08476 426 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 KCNJ6P48051 423 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 USP11P51784 963 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 MFAP3P55082 362 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 DR1Q01658 176 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 PSMD2Q13200 908 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 CTTNQ14247 550 aaKnown RBP11.58□□□□□ -0.56
HNF4A-201ENST00000316099 KRT81Q14533 505 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 KRT31Q15323 416 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 PPP1R2P3Q6NXS1 205 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 ACER1Q8TDN7 264 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 ZNF148Q9UQR1 794 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 CD2APQ9Y5K6 639 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 LAMA4Q16363 1823 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 POC1B-GALNT4F8VUJ3 575 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 KRT3P12035 628 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 ATF7P17544 494 aaPredicted RBP11.58□□□□□ -0.56
HNF4A-201ENST00000316099 CXCR5P32302 372 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 PDCLQ13371 301 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 TMED2Q15363 201 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 DRC3Q9H069 523 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 ANAPC5Q9UJX4 755 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 NFU1Q9UMS0 254 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 ROBO3Q96MS0 1386 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 ABCB11O95342 1321 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 POTEB3A0JP26 581 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 POTECB2RU33 542 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 E9PMD0 336 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 NOP56O00567 594 aaKnown RBP11.58□□□□□ -0.56
HNF4A-201ENST00000316099 CD19P15391 556 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 TNNI1P19237 187 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 FUT2Q10981 343 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 DRP2Q13474 957 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 NXNQ6DKJ4 435 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 POTEBQ6S5H4 581 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 CCDC125Q86Z20 511 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 CCSER1Q9C0I3 900 aa11.58□□□□□ -0.56
HNF4A-201ENST00000316099 ESYT2A0FGR8 921 aa11.57□□□□□ -0.56
HNF4A-201ENST00000316099 TARSL2A2RTX5 802 aaKnown RBP11.57□□□□□ -0.56
HNF4A-201ENST00000316099 H0YCG3 227 aa11.57□□□□□ -0.56
HNF4A-201ENST00000316099 MTMR2Q13614 643 aa11.57□□□□□ -0.56
HNF4A-201ENST00000316099 SMCR8Q8TEV9 937 aaPredicted RBP11.57□□□□□ -0.56
HNF4A-201ENST00000316099 CDKL2Q92772 493 aa11.57□□□□□ -0.56
HNF4A-201ENST00000316099 TRIM6Q9C030 488 aaPredicted RBP11.57□□□□□ -0.56
HNF4A-201ENST00000316099 ABHD10Q9NUJ1 306 aa11.57□□□□□ -0.56
HNF4A-201ENST00000316099 FGFR1OP2Q9NVK5 253 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms