RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 NCK2O43639 380 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 RB1P06400 928 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
ABCD3-201ENST00000315713 INSRRP14616 1297 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 U2AF2P26368 475 aaKnown RBP eCLIP13.6□□□□□ -0.236e-7■■□□□ 13.5
ABCD3-201ENST00000315713 MRE11P49959 708 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 NHLH1Q02575 133 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 SMAD4Q13485 552 aaKnown RBP13.6□□□□□ -0.23
ABCD3-201ENST00000315713 ZNF174Q15697 407 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 TTC38Q5R3I4 469 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 MARCH8Q5T0T0 291 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 TSHZ1Q6ZSZ6 1077 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 RDM1Q8NG50 284 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 HAS1Q92839 578 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 ZNF689Q96CS4 500 aaPredicted RBP13.6□□□□□ -0.23
ABCD3-201ENST00000315713 INTS4Q96HW7 963 aaKnown RBP13.6□□□□□ -0.23
ABCD3-201ENST00000315713 IGFLR1Q9H665 355 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 AGO3Q9H9G7 860 aaKnown RBP13.6□□□□□ -0.23
ABCD3-201ENST00000315713 MRPL42Q9Y6G3 142 aaKnown RBP13.6□□□□□ -0.23
ABCD3-201ENST00000315713 USP34Q70CQ2 3546 aa13.6□□□□□ -0.23
ABCD3-201ENST00000315713 VPS37CA5D8V6 355 aaPredicted RBP13.59□□□□□ -0.23
ABCD3-201ENST00000315713 RRN3P2A6NIE6 340 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 WNT7AO00755 349 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 ENPP3O14638 875 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 HBP1O60381 514 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 DGKIO75912 1065 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 PDCP20941 246 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 CD52P31358 61 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 TRAPPC10P48553 1259 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 MRPS6P82932 125 aaKnown RBP13.59□□□□□ -0.23
ABCD3-201ENST00000315713 PPP2R5CQ13362 524 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 PAN2Q504Q3 1202 aaKnown RBP13.59□□□□□ -0.23
ABCD3-201ENST00000315713 NCAPH2Q6IBW4 605 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 ADGRD2Q7Z7M1 963 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 RSPH3Q86UC2 560 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 ATP8B4Q8TF62 1192 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 BBXQ8WY36 941 aaPredicted RBP13.59□□□□□ -0.23
ABCD3-201ENST00000315713 POP1Q99575 1024 aaKnown RBP13.59□□□□□ -0.23
ABCD3-201ENST00000315713 FAM49AQ9H0Q0 323 aaPredicted RBP13.59□□□□□ -0.23
ABCD3-201ENST00000315713 ALG13Q9NP73 1137 aaKnown RBP13.59□□□□□ -0.23
ABCD3-201ENST00000315713 CD207Q9UJ71 328 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 VAV3Q9UKW4 847 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 MAFBQ9Y5Q3 323 aaPredicted RBP13.59□□□□□ -0.23
ABCD3-201ENST00000315713 CFAP54Q96N23 3096 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 IGSF9BQ9UPX0 1349 aa13.59□□□□□ -0.23
ABCD3-201ENST00000315713 ITGB1P05556 798 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 DNAJB1P25685 340 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 TXKP42681 527 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 NDUFV1P49821 464 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 TMEM62Q0P6H9 643 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 ORC2Q13416 577 aaPredicted RBP13.58□□□□□ -0.24
ABCD3-201ENST00000315713 CAMK1Q14012 370 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 B3GNT9Q6UX72 402 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 RNF135Q8IUD6 432 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 TRAPPC12Q8WVT3 735 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 FAM167AQ96KS9 214 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 PLVAPQ9BX97 442 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 TTC12Q9H892 705 aaPredicted RBP13.58□□□□□ -0.24
ABCD3-201ENST00000315713 PCDHA12Q9UN75 941 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 PLAGL2Q9UPG8 496 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 COL1A2P08123 1366 aa13.58□□□□□ -0.24
ABCD3-201ENST00000315713 EML1O00423 815 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 OATP04181 439 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 OR52Z1P0C646 297 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 ATP4AP20648 1035 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 GATMP50440 423 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 PRKCEQ02156 737 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 NBR1Q14596 966 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 UGCGQ16739 394 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 RILPL1Q5EBL4 403 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 HERC4Q5GLZ8 1057 aaPredicted RBP13.57□□□□□ -0.24
ABCD3-201ENST00000315713 ZNF484Q5JVG2 852 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 NPAS4Q8IUM7 802 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 CMTR2Q8IYT2 770 aaKnown RBP13.57□□□□□ -0.24
ABCD3-201ENST00000315713 TMEM60Q9H2L4 133 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 NRBP2Q9NSY0 501 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 CEP131Q9UPN4 1083 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 PCDHGC5Q9Y5F6 944 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 TRPV2Q9Y5S1 764 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 PLXNA3P51805 1871 aa13.57□□□□□ -0.24
ABCD3-201ENST00000315713 DKC1O60832 514 aaKnown RBP eCLIP13.56□□□□□ -0.24
ABCD3-201ENST00000315713 IBSPP21815 317 aaPredicted RBP13.56□□□□□ -0.24
ABCD3-201ENST00000315713 PSMC5P62195 406 aa13.56□□□□□ -0.24
ABCD3-201ENST00000315713 EPHA7Q15375 998 aa13.56□□□□□ -0.24
ABCD3-201ENST00000315713 MTHFD1LQ6UB35 978 aa13.56□□□□□ -0.24
ABCD3-201ENST00000315713 RTN4RL1Q86UN2 441 aaPredicted RBP13.56□□□□□ -0.24
ABCD3-201ENST00000315713 CRIPAKQ8N1N5 446 aa13.56□□□□□ -0.24
ABCD3-201ENST00000315713 KLHL23Q8NBE8 558 aa13.56□□□□□ -0.24
ABCD3-201ENST00000315713 P2RX5Q93086 422 aa13.56□□□□□ -0.24
ABCD3-201ENST00000315713 MSLNLQ96KJ4 702 aa13.56□□□□□ -0.24
ABCD3-201ENST00000315713 MTMR9Q96QG7 549 aa13.56□□□□□ -0.24
ABCD3-201ENST00000315713 CLEC1BQ9P126 229 aa13.56□□□□□ -0.24
ABCD3-201ENST00000315713 SEPT9Q9UHD8 586 aaPredicted RBP13.56□□□□□ -0.24
ABCD3-201ENST00000315713 PCDHB6Q9Y5E3 794 aa13.56□□□□□ -0.24
ABCD3-201ENST00000315713 ARID2Q68CP9 1835 aa13.55□□□□□ -0.24
ABCD3-201ENST00000315713 MYH15Q9Y2K3 1946 aa13.55□□□□□ -0.24
ABCD3-201ENST00000315713 M0QZ92 97 aa13.55□□□□□ -0.24
ABCD3-201ENST00000315713 ZNF862O60290 1169 aa13.55□□□□□ -0.24
ABCD3-201ENST00000315713 GLP2RO95838 553 aa13.55□□□□□ -0.24
ABCD3-201ENST00000315713 P4HBP07237 508 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms