RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 IFIH1Q9BYX4 1025 aaKnown RBP20.11■□□□□ 0.81
CCDC43-201ENST00000315286 PDCL3Q9H2J4 239 aa20.11■□□□□ 0.81
CCDC43-201ENST00000315286 FRMD4BQ9Y2L6 1034 aa20.11■□□□□ 0.81
CCDC43-201ENST00000315286 PSAPP07602 524 aa20.1■□□□□ 0.81
CCDC43-201ENST00000315286 UCHL3P15374 230 aa20.1■□□□□ 0.81
CCDC43-201ENST00000315286 ACTR2P61160 394 aa20.1■□□□□ 0.81
CCDC43-201ENST00000315286 TTLL12Q14166 644 aaPredicted RBP20.1■□□□□ 0.81
CCDC43-201ENST00000315286 STXBP2Q15833 593 aa20.1■□□□□ 0.81
CCDC43-201ENST00000315286 TDRD12Q587J7 1177 aaKnown RBP20.1■□□□□ 0.81
CCDC43-201ENST00000315286 GBP6Q6ZN66 633 aa20.1■□□□□ 0.81
CCDC43-201ENST00000315286 USP50Q70EL3 339 aaPredicted RBP20.1■□□□□ 0.81
CCDC43-201ENST00000315286 HAUS6Q7Z4H7 955 aa20.1■□□□□ 0.81
CCDC43-201ENST00000315286 TMEM206Q9H813 350 aa20.1■□□□□ 0.81
CCDC43-201ENST00000315286 AIPL1Q9NZN9 384 aa20.1■□□□□ 0.81
CCDC43-201ENST00000315286 TISP43B9A030 160 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 EIF3JO75822 258 aaKnown RBP20.09■□□□□ 0.81
CCDC43-201ENST00000315286 EPHX2P34913 555 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 NF2P35240 595 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 GTF2BQ00403 316 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 GFPT1Q06210 699 aaPredicted RBP20.09■□□□□ 0.81
CCDC43-201ENST00000315286 OTUD6AQ7L8S5 288 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 ATP6V0A1Q93050 837 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 L3MBTL3Q96JM7 780 aaPredicted RBP20.09■□□□□ 0.81
CCDC43-201ENST00000315286 ACCSQ96QU6 501 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 SPATC1LQ9H0A9 340 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 CGNQ9P2M7 1197 aaKnown RBP20.09■□□□□ 0.81
CCDC43-201ENST00000315286 MYH9P35579 1960 aaKnown RBP20.09■□□□□ 0.81
CCDC43-201ENST00000315286 GTPBP10A4D1E9 387 aaKnown RBP20.09■□□□□ 0.81
CCDC43-201ENST00000315286 SPDYE5A6NIY4 337 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 CXCL11O14625 94 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 SLC16A4O15374 487 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 EXOC3O60645 756 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 IRX3P78415 501 aaPredicted RBP20.09■□□□□ 0.81
CCDC43-201ENST00000315286 ARID5AQ03989 594 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 ABHD15Q6UXT9 468 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 NCAPG2Q86XI2 1143 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 CCDC60Q8IWA6 550 aaPredicted RBP20.09■□□□□ 0.81
CCDC43-201ENST00000315286 FAM133AQ8N9E0 248 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 RDH13Q8NBN7 331 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 CEP170P1Q96L14 293 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 ASCC2Q9H1I8 757 aaPredicted RBP20.09■□□□□ 0.81
CCDC43-201ENST00000315286 ST6GALNAC4Q9H4F1 302 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 SIX2Q9NPC8 291 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 GCNT4Q9P109 453 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 FBXO40Q9UH90 709 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 FHOD1Q9Y613 1164 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 PFASO15067 1338 aa20.09■□□□□ 0.81
CCDC43-201ENST00000315286 ALDH5A1P51649 535 aaPredicted RBP20.08■□□□□ 0.81
CCDC43-201ENST00000315286 NCKAP1LP55160 1127 aa20.08■□□□□ 0.81
CCDC43-201ENST00000315286 MYBPC2Q14324 1141 aa20.08■□□□□ 0.81
CCDC43-201ENST00000315286 EHBP1Q8NDI1 1231 aa20.08■□□□□ 0.81
CCDC43-201ENST00000315286 ZC3H15Q8WU90 426 aaKnown RBP20.08■□□□□ 0.81
CCDC43-201ENST00000315286 PAGR1Q9BTK6 254 aa20.08■□□□□ 0.81
CCDC43-201ENST00000315286 TSGA10Q9BZW7 698 aa20.08■□□□□ 0.81
CCDC43-201ENST00000315286 PCIF1Q9H4Z3 704 aa20.08■□□□□ 0.81
CCDC43-201ENST00000315286 MACROD2A1Z1Q3 448 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 TFRCP02786 760 aaKnown RBP20.07■□□□□ 0.8
CCDC43-201ENST00000315286 ICAM3P32942 547 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 MAGEA1P43355 309 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 TUBB2AQ13885 445 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 TUBB2BQ9BVA1 445 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 R3HDMLQ9H3Y0 253 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 ENC1O14682 589 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 DKC1O60832 514 aaKnown RBP eCLIP20.07■□□□□ 0.8
CCDC43-201ENST00000315286 FMO5P49326 533 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 AMPD2Q01433 879 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 ENOX2Q16206 610 aaKnown RBP20.07■□□□□ 0.8
CCDC43-201ENST00000315286 ASIC2Q16515 512 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 SEPT14Q6ZU15 432 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 CYFIP1Q7L576 1253 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 CBWD1Q9BRT8 395 aa20.07■□□□□ 0.8
CCDC43-201ENST00000315286 AJAP1Q9UKB5 411 aaPredicted RBP20.07■□□□□ 0.8
CCDC43-201ENST00000315286 ARID2Q68CP9 1835 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 MYH10P35580 1976 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 SOWAHBA6NEL2 793 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 RBAK-RBAKDNI3L0D1 243 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 CNMDO75829 334 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 TRIM49P0CI25 452 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 TRIM49CP0CI26 452 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 SOX10P56693 466 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 KLHL30Q0D2K2 578 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 PPP2R5AQ15172 486 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 MIS18BP1Q6P0N0 1132 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 FBXO38Q6PIJ6 1188 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 RSRC2Q7L4I2 434 aaKnown RBP20.06■□□□□ 0.8
CCDC43-201ENST00000315286 IRF2BP2Q7Z5L9 587 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 SPAG5Q96R06 1193 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 KCNH4Q9UQ05 1017 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 CCDC169A6NNP5 214 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 POTEB2H3BUK9 544 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 NPTX2P47972 431 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 PRKCEQ02156 737 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 BFSP1Q12934 665 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 CBWD6Q4V339 395 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 CBWD3Q5JTY5 395 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 CBWD5Q5RIA9 395 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 GJB7Q6PEY0 223 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 SRGAP1Q7Z6B7 1085 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 C12orf56Q8IXR9 622 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 TMEM174Q8WUU8 243 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms