RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 VSTM4Q8IW00 320 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 EPC1Q9H2F5 836 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 NEMP1O14524 444 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 MAN1A2O60476 641 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 PYGLP06737 847 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 WDR48Q8TAF3 677 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 WDR11Q9BZH6 1224 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 BHMT2Q9H2M3 363 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 ATP8B3O60423 1300 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 ERBB4Q15303 1308 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 UGGT1Q9NYU2 1555 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 RNF103-CHMP3A0A140T963 221 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 SUPT3HO75486 399 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 MDM2Q00987 491 aaPredicted RBP22.37■■□□□ 1.17
KDM3B-201ENST00000314358 RASSF3Q86WH2 238 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 LINC00301Q8NCQ3 95 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 CPVLQ9H3G5 476 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 ACTR5Q9H9F9 607 aaPredicted RBP22.37■■□□□ 1.17
KDM3B-201ENST00000314358 ZSWIM5Q9P217 1185 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 ADCY2Q08462 1091 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 ALKBH5Q6P6C2 394 aaKnown RBP22.37■■□□□ 1.17
KDM3B-201ENST00000314358 AK8Q96MA6 479 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 CASS4Q9NQ75 786 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 MYOM2P54296 1465 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 CFAP69A5D8W1 941 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 K7ERI5 159 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 PSAPP07602 524 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 CACNB3P54284 484 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 NME3Q13232 169 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 MAP4K1Q92918 833 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 ESYT3A0FGR9 886 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 MAGOHP61326 146 aaKnown RBP22.37■■□□□ 1.17
KDM3B-201ENST00000314358 RNF219Q5W0B1 726 aaPredicted RBP22.37■■□□□ 1.17
KDM3B-201ENST00000314358 SLC26A7Q8TE54 656 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 DHX38Q92620 1227 aaKnown RBP22.37■■□□□ 1.17
KDM3B-201ENST00000314358 NAF1Q96HR8 494 aaKnown RBP22.37■■□□□ 1.17
KDM3B-201ENST00000314358 FAM161BQ96MY7 647 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 POLR3EQ9NVU0 708 aa22.37■■□□□ 1.17
KDM3B-201ENST00000314358 SRP68Q9UHB9 627 aaKnown RBP22.37■■□□□ 1.17
KDM3B-201ENST00000314358 GGCXP38435 758 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 C1orf228Q6PIY5 440 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 KLC2Q9H0B6 622 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 THAP9Q9H5L6 903 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 KCNA4P22459 653 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 CCNA1P78396 465 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 PAMP19021 973 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 AP1B1Q10567 949 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 B4GALNT2Q8NHY0 566 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 CCHCR1Q8TD31 782 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 TJP3O95049 919 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 ZBED6P86452 979 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 CACNB2Q08289 660 aaPredicted RBP22.36■■□□□ 1.17
KDM3B-201ENST00000314358 ZNF746Q6NUN9 644 aaPredicted RBP22.36■■□□□ 1.17
KDM3B-201ENST00000314358 DNAJC12Q9UKB3 198 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 SNX5Q9Y5X3 404 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 COPS2P61201 443 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 ALS2CLQ60I27 953 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 ARMCX2Q7L311 632 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 PPM1NQ8N819 430 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 ZNF513Q8N8E2 541 aaPredicted RBP22.36■■□□□ 1.17
KDM3B-201ENST00000314358 AFG1LQ8WV93 481 aa22.36■■□□□ 1.17
KDM3B-201ENST00000314358 ADD3Q9UEY8 706 aaKnown RBP22.36■■□□□ 1.17
KDM3B-201ENST00000314358 SSH2Q76I76 1423 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 UBE3CQ15386 1083 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 ACCSLQ4AC99 568 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 ACAD11Q709F0 780 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 PPHLN1Q8NEY8 458 aaKnown RBP22.35■■□□□ 1.17
KDM3B-201ENST00000314358 ULK4Q96C45 1275 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 BTBD6Q96KE9 485 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 STX18Q9P2W9 335 aaKnown RBP22.35■■□□□ 1.17
KDM3B-201ENST00000314358 WDR75Q8IWA0 830 aaKnown RBP22.35■■□□□ 1.17
KDM3B-201ENST00000314358 EGFL8Q99944 293 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 ZBED2Q9BTP6 218 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 UBA6A0AVT1 1052 aaPredicted RBP22.35■■□□□ 1.17
KDM3B-201ENST00000314358 NOP53Q9NZM5 478 aaKnown RBP22.35■■□□□ 1.17
KDM3B-201ENST00000314358 ZBTB1Q9Y2K1 713 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 IKBKBO14920 756 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 GCLMP48507 274 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 CNOT8Q9UFF9 292 aaKnown RBP22.35■■□□□ 1.17
KDM3B-201ENST00000314358 XDHP47989 1333 aa22.35■■□□□ 1.17
KDM3B-201ENST00000314358 DCTN3O75935 186 aa22.34■■□□□ 1.17
KDM3B-201ENST00000314358 PTK2BQ14289 1009 aa22.34■■□□□ 1.17
KDM3B-201ENST00000314358 SLC17A8Q8NDX2 589 aa22.34■■□□□ 1.17
KDM3B-201ENST00000314358 E5RI56 91 aa22.34■■□□□ 1.17
KDM3B-201ENST00000314358 MOCS2O96007 188 aaPredicted RBP22.34■■□□□ 1.17
KDM3B-201ENST00000314358 ATXN3P54252 364 aaPredicted RBP22.34■■□□□ 1.17
KDM3B-201ENST00000314358 ATG3Q9NT62 314 aa22.34■■□□□ 1.17
KDM3B-201ENST00000314358 DDIASQ8IXT1 998 aa22.34■■□□□ 1.17
KDM3B-201ENST00000314358 VPS39Q96JC1 886 aa22.34■■□□□ 1.17
KDM3B-201ENST00000314358 ADAM22Q9P0K1 906 aa22.34■■□□□ 1.17
KDM3B-201ENST00000314358 ZNF772Q68DY9 489 aaPredicted RBP22.34■■□□□ 1.17
KDM3B-201ENST00000314358 ZNF711Q9Y462 761 aa22.34■■□□□ 1.17
KDM3B-201ENST00000314358 HMGB1P1B2RPK0 211 aaPredicted RBP22.34■■□□□ 1.17
KDM3B-201ENST00000314358 SH2B2O14492 632 aaPredicted RBP22.34■■□□□ 1.17
KDM3B-201ENST00000314358 ADD2P35612 726 aa22.34■■□□□ 1.17
KDM3B-201ENST00000314358 ECT2Q9H8V3 914 aa22.34■■□□□ 1.17
KDM3B-201ENST00000314358 PRPF4O43172 522 aaKnown RBP eCLIP22.33■■□□□ 1.178e-22■■■■■ 51.4
KDM3B-201ENST00000314358 TEKT4Q8WW24 435 aa22.33■■□□□ 1.17
KDM3B-201ENST00000314358 CCNE1P24864 410 aa22.33■■□□□ 1.17
KDM3B-201ENST00000314358 MORF4L2Q15014 288 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms