RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 EXOC3L4Q17RC7 722 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 USH1GQ495M9 461 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 ERAP1Q9NZ08 941 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 CHMLP26374 656 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 IFRD2Q12894 506 aaPredicted RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 TAB3Q8N5C8 712 aaPredicted RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 APPL2Q8NEU8 664 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 HFM1A2PYH4 1435 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 GSPT1P15170 499 aaKnown RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 RBL2Q08999 1139 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 LAYNQ6UX15 382 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 USP28Q96RU2 1077 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 BLZF1Q9H2G9 400 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 AZI2Q9H6S1 392 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 METTL14Q9HCE5 456 aaKnown RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 HMG20AQ9NP66 347 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 TMEM161AQ9NX61 479 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 DAPK1P53355 1430 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 SOWAHDA6NJG2 315 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 AP1G2O75843 785 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 RALBP11234 206 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 ATF4P18848 351 aaPredicted RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 PTK2BQ14289 1009 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 KLHL24Q6TFL4 600 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 TRAPPC9Q96Q05 1148 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.19□□□□□ -0.621e-7■□□□□ 11.2
SEC16A-203ENST00000313050 ABCE1P61221 599 aaKnown RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 SEC16BQ96JE7 1060 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 FAM129BQ96TA1 746 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 THTPAQ9BU02 230 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 SENP1Q9P0U3 644 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 TRMT112Q9UI30 125 aaKnown RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 TRAP1Q12931 704 aaKnown RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 BBS9Q3SYG4 887 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 NHEJ1Q9H9Q4 299 aaPredicted RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 DDX5P17844 614 aaKnown RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 KRT31Q15323 416 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 SLC9C2Q5TAH2 1124 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 ANKRD44Q8N8A2 993 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 HDHD2Q9H0R4 259 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 FAM32AQ9Y421 112 aaKnown RBP11.19□□□□□ -0.62
SEC16A-203ENST00000313050 FAM135AQ9P2D6 1515 aa11.19□□□□□ -0.62
SEC16A-203ENST00000313050 TJP3O95049 919 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 MED26O95402 600 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 GRSF1Q12849 480 aaKnown RBP eCLIP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 SPANXN2Q5MJ10 180 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 CYB5D1Q6P9G0 228 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 PPP2R3BQ9Y5P8 575 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 CYTH3O43739 400 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 SNX2O60749 519 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 TOM1O60784 492 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 CCDC81Q6ZN84 652 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 DIS3LQ8TF46 1054 aaKnown RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 PDCD6IPQ8WUM4 868 aaKnown RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 FBXO28Q9NVF7 368 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 LPCAT2Q7L5N7 544 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 CACNA2D2Q9NY47 1150 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 ZNF644Q9H582 1327 aaPredicted RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 LRRC9Q6ZRR7 1453 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 MSH6P52701 1360 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 SBNO2Q9Y2G9 1366 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 ALDH18A1P54886 795 aaKnown RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 THOC7Q6I9Y2 204 aaKnown RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 VIL1P09327 827 aaKnown RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 GYS1P13807 737 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 MDH1P40925 334 aaKnown RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 PPP2R5BQ15173 497 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 PLEKHM2Q8IWE5 1019 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 TCAIMQ8N3R3 496 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 VTI1AQ96AJ9 217 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 SLC12A5Q9H2X9 1139 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 ANKRD50Q9ULJ7 1429 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 CBFA2T3O75081 653 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 ZNF579Q8NAF0 562 aaKnown RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 SKA1Q96BD8 255 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 C1orf50Q9BV19 199 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 KLHL4Q9C0H6 718 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 C1orf232A0A0U1RR37 186 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 PFKFB1P16118 471 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 PLCG2P16885 1265 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 YARSP54577 528 aaKnown RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 ZNF786Q8N393 782 aa11.18□□□□□ -0.62
SEC16A-203ENST00000313050 MSL3Q8N5Y2 521 aaKnown RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 SCG3Q8WXD2 468 aaKnown RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 TAF1DQ9H5J8 278 aaPredicted RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 MRPL47Q9HD33 250 aaKnown RBP11.18□□□□□ -0.62
SEC16A-203ENST00000313050 NDUFA10O95299 355 aa11.17□□□□□ -0.62
SEC16A-203ENST00000313050 SEC24BO95487 1268 aa11.17□□□□□ -0.62
SEC16A-203ENST00000313050 HSPA2P54652 639 aa11.17□□□□□ -0.62
SEC16A-203ENST00000313050 COG1Q8WTW3 980 aa11.17□□□□□ -0.62
SEC16A-203ENST00000313050 MIEF2Q96C03 454 aa11.17□□□□□ -0.62
SEC16A-203ENST00000313050 DNAJC12Q9UKB3 198 aa11.17□□□□□ -0.62
SEC16A-203ENST00000313050 PCDHA13Q9Y5I0 950 aa11.17□□□□□ -0.62
SEC16A-203ENST00000313050 LSP1P33241 339 aa11.17□□□□□ -0.62
SEC16A-203ENST00000313050 ARL4CP56559 192 aa11.17□□□□□ -0.62
SEC16A-203ENST00000313050 EXOSC10Q01780 885 aaKnown RBP11.17□□□□□ -0.62
SEC16A-203ENST00000313050 RGS21Q2M5E4 152 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms