RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 ASRGL1Q7L266 308 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 LONP2Q86WA8 852 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 B4GALNT2Q8NHY0 566 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 MOV10L1Q9BXT6 1211 aaKnown RBP19.51■□□□□ 0.71
SPSB4-201ENST00000310546 G3BP2Q9UN86 482 aaKnown RBP19.51■□□□□ 0.71
SPSB4-201ENST00000310546 MYH4Q9Y623 1939 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 RANBP1P43487 201 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 GCLCP48506 637 aaPredicted RBP19.51■□□□□ 0.71
SPSB4-201ENST00000310546 MRPS35P82673 323 aaKnown RBP19.51■□□□□ 0.71
SPSB4-201ENST00000310546 DR1Q01658 176 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 RNF220Q5VTB9 566 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 SV2BQ7L1I2 683 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 RMDN2Q96LZ7 410 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 CCDC134Q9H6E4 229 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 RGL1Q9NZL6 768 aa19.51■□□□□ 0.71
SPSB4-201ENST00000310546 MYMKA6NI61 221 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 CCNT1O60563 726 aaKnown RBP19.5■□□□□ 0.71
SPSB4-201ENST00000310546 FLOT1O75955 427 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 AGTP01019 485 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 FGFR4P22455 802 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 LRRC63Q05C16 580 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 PLS1Q14651 629 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 C6orf118Q5T5N4 469 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 TPCN2Q8NHX9 752 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 TSG101Q99816 390 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 DLGAP2Q9P1A6 1054 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 DAAM1Q9Y4D1 1078 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 TIAM2Q8IVF5 1701 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 OAS1P00973 400 aaKnown RBP19.5■□□□□ 0.71
SPSB4-201ENST00000310546 EPS15P42566 896 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 ADAM9Q13443 819 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 GRIK5Q16478 980 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.5■□□□□ 0.71
SPSB4-201ENST00000310546 SPATA21Q7Z572 469 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 ANKRD42Q8N9B4 389 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 TRIM4Q9C037 500 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 RXFP1Q9HBX9 757 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 PCDHA6Q9UN73 950 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 LRRC42Q9Y546 428 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 PCDHA8Q9Y5H6 950 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 COL4A3BPQ9Y5P4 624 aa19.5■□□□□ 0.71
SPSB4-201ENST00000310546 ALKBH5Q6P6C2 394 aaKnown RBP19.49■□□□□ 0.71
SPSB4-201ENST00000310546 ZNF571Q7Z3V5 609 aaPredicted RBP19.49■□□□□ 0.71
SPSB4-201ENST00000310546 GUF1Q8N442 669 aaKnown RBP19.49■□□□□ 0.71
SPSB4-201ENST00000310546 GDAP1Q8TB36 358 aa19.49■□□□□ 0.71
SPSB4-201ENST00000310546 DDX23Q9BUQ8 820 aaKnown RBP19.49■□□□□ 0.71
SPSB4-201ENST00000310546 TRIM7Q9C029 511 aa19.49■□□□□ 0.71
SPSB4-201ENST00000310546 ARL2BPQ9Y2Y0 163 aa19.49■□□□□ 0.71
SPSB4-201ENST00000310546 ZNF804BA4D1E1 1349 aa19.49■□□□□ 0.71
SPSB4-201ENST00000310546 ABCB11O95342 1321 aa19.49■□□□□ 0.71
SPSB4-201ENST00000310546 HIBADHP31937 336 aaKnown RBP19.49■□□□□ 0.71
SPSB4-201ENST00000310546 RFC5P40937 340 aa19.49■□□□□ 0.71
SPSB4-201ENST00000310546 HEATR3Q7Z4Q2 680 aa19.49■□□□□ 0.71
SPSB4-201ENST00000310546 ZNF384Q8TF68 577 aa19.49■□□□□ 0.71
SPSB4-201ENST00000310546 CALML4Q96GE6 196 aa19.49■□□□□ 0.71
SPSB4-201ENST00000310546 ERP44Q9BS26 406 aa19.49■□□□□ 0.71
SPSB4-201ENST00000310546 ZDHHC18Q9NUE0 388 aa19.49■□□□□ 0.71
SPSB4-201ENST00000310546 RASGRF2O14827 1237 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 LGR5O75473 907 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 OR52Z1P0C646 297 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 TAOK1Q7L7X3 1001 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 TBC1D16Q8TBP0 767 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 FAM210AQ96ND0 272 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 RNPEPL1Q9HAU8 725 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.48■□□□□ 0.71
SPSB4-201ENST00000310546 MAGEB6P1A0A0J9YX57 407 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 RNF8O76064 485 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 GNAZP19086 355 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 CALB2P22676 271 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 KLC1Q07866 573 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 UBE4AQ14139 1066 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 MTHFD1LQ6UB35 978 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 KCNK9Q9NPC2 374 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 NAGPAQ9UK23 515 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 COL24A1Q17RW2 1714 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 PLSCR1O15162 318 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 RGL2O15211 777 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 ZBTB48P10074 688 aaPredicted RBP19.48■□□□□ 0.71
SPSB4-201ENST00000310546 ACTN1P12814 892 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 CREB1P16220 341 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 CNGA1P29973 690 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 ALDH3A1P30838 453 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 POU5F1Q01860 360 aaKnown RBP19.48■□□□□ 0.71
SPSB4-201ENST00000310546 UTP4Q969X6 686 aaKnown RBP19.48■□□□□ 0.71
SPSB4-201ENST00000310546 AK8Q96MA6 479 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 AIPL1Q9NZN9 384 aa19.48■□□□□ 0.71
SPSB4-201ENST00000310546 COL1A1P02452 1464 aaPredicted RBP19.47■□□□□ 0.71
SPSB4-201ENST00000310546 C6orf229H3BNL8 230 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 NPTXRO95502 500 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 ATP6V1C1P21283 382 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 KLRC3Q07444 240 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 UNC13DQ70J99 1090 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 RASGEF1CQ8N431 466 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 TMEM237Q96Q45 408 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 RAB3IPQ96QF0 476 aaPredicted RBP19.47■□□□□ 0.71
SPSB4-201ENST00000310546 NUDCD1Q96RS6 583 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 ANAPC4Q9UJX5 808 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 KRT13P13646 458 aa19.47■□□□□ 0.71
SPSB4-201ENST00000310546 FKBP3Q00688 224 aaKnown RBP19.47■□□□□ 0.71
SPSB4-201ENST00000310546 DIXDC1Q155Q3 683 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms