RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 PEX3P56589 373 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 RTP1P59025 263 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 SP3Q02447 781 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 IRF5Q13568 498 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 IQSEC1Q6DN90 963 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 CCDC62Q6P9F0 684 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 CNGA4Q8IV77 575 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 TCP11Q8WWU5 503 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 BBXQ8WY36 941 aaPredicted RBP12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 GPR20Q99678 358 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 NIFKQ9BYG3 293 aaKnown RBP12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 POLD4Q9HCU8 107 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 KMT5AQ9NQR1 393 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 FRMD4BQ9Y2L6 1034 aa12.53□□□□□ -0.4
CTDSPL-202ENST00000310189 DOCK5Q9H7D0 1870 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 AKR1B15C9JRZ8 316 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 SLC16A3O15427 465 aaKnown RBP12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 LACTBP83111 547 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 CCDC144BQ3MJ40 725 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 VWA3BQ502W6 1294 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 ZCWPW2Q504Y3 356 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 BRDTQ58F21 947 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 HAUS6Q7Z4H7 955 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 FRMD5Q7Z6J6 570 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 IRF2BP1Q8IU81 584 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 GLIS3Q8NEA6 775 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 ZNF397Q8NF99 534 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 SPIRE2Q8WWL2 714 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 ZNF830Q96NB3 372 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 ST6GALNAC4Q9H4F1 302 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 BCAS3Q9H6U6 928 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 ARMCX3Q9UH62 379 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 ZHX1Q9UKY1 873 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 ZNF215Q9UL58 517 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 LRRC37A2A6NM11 1700 aa12.52□□□□□ -0.41
CTDSPL-202ENST00000310189 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 GPR25O00155 361 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 TEX33O43247 280 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 CCP110O43303 1012 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 LGR5O75473 907 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 ARIH2O95376 493 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 NR3C1P04150 777 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 SKILP12757 684 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 PSMC4P43686 418 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 CASP5P51878 434 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 STRN3Q13033 797 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 MAPK7Q13164 816 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 ACVR2BQ13705 512 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 MYBPC2Q14324 1141 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 EMC2Q15006 297 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 NFIL3Q16649 462 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 CEP135Q66GS9 1140 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 APTXQ7Z2E3 356 aaKnown RBP12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 DAW1Q8N136 415 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 CCDC51Q96ER9 411 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 NDST4Q9H3R1 872 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 ERAP1Q9NZ08 941 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 ZNF236Q9UL36 1845 aa12.51□□□□□ -0.41
CTDSPL-202ENST00000310189 PHLPP2Q6ZVD8 1323 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 TMEM150BA6NC51 233 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 SLC16A4O15374 487 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 HBP1O60381 514 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 HOXC6P09630 235 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 TRIM21P19474 475 aaKnown RBP12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 PSMC2P35998 433 aaKnown RBP12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 NCKAP1LP55160 1127 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 HSDL1Q3SXM5 330 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 ZC2HC1CQ53FD0 456 aaPredicted RBP12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 MORN1Q5T089 497 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 TAPT1Q6NXT6 567 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 LRRC55Q6ZSA7 311 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 DNAJC5GQ8N7S2 189 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 PPTC7Q8NI37 304 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 ATP8B4Q8TF62 1192 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 CACTINQ8WUQ7 758 aaKnown RBP12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 EMID1Q96A84 441 aaPredicted RBP12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 EEF2KMTQ96G04 330 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 SH2D3AQ9BRG2 576 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 MKNK1Q9BUB5 465 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 FGFBP2Q9BYJ0 223 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 ARHGAP39Q9C0H5 1083 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 POLR3FQ9H1D9 316 aaPredicted RBP12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 PDGFCQ9NRA1 345 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 INTS13Q9NVM9 706 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 ZNHIT6Q9NWK9 470 aaKnown RBP12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 WDR81Q562E7 1941 aa12.5□□□□□ -0.41
CTDSPL-202ENST00000310189 EXOC3O60645 756 aa12.49□□□□□ -0.41
CTDSPL-202ENST00000310189 FKTNO75072 461 aa12.49□□□□□ -0.41
CTDSPL-202ENST00000310189 PPFIA4O75335 1185 aa12.49□□□□□ -0.41
CTDSPL-202ENST00000310189 STBD1O95210 358 aa12.49□□□□□ -0.41
CTDSPL-202ENST00000310189 SNAI1O95863 264 aaPredicted RBP12.49□□□□□ -0.41
CTDSPL-202ENST00000310189 XRCC5P13010 732 aaKnown RBP12.49□□□□□ -0.41
CTDSPL-202ENST00000310189 KRT13P13646 458 aa12.49□□□□□ -0.41
CTDSPL-202ENST00000310189 GTF2BQ00403 316 aa12.49□□□□□ -0.41
CTDSPL-202ENST00000310189 TNFAIP2Q03169 654 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms