RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 DDX4Q9NQI0 724 aaKnown RBP9.99□□□□□ -0.81
XCR1-201ENST00000309285 ABHD10Q9NUJ1 306 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 E9PMD0 336 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 SRGAP2O75044 1071 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 ATICP31939 592 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 Q3C1V9 767 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 XKR9Q5GH70 373 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 NYAP1Q6ZVC0 841 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 UNC13DQ70J99 1090 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 SESTD1Q86VW0 696 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 WDR24Q96S15 920 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 ADGRG1Q9Y653 693 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 MAP3K7O43318 606 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 NDUFA10O95299 355 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 ARHGAP4P98171 946 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 GUCY1A3Q02108 690 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 EN1Q05925 392 aaPredicted RBP9.99□□□□□ -0.81
XCR1-201ENST00000309285 KCNB1Q14721 858 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 CCDC93Q567U6 631 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 CDAN1Q8IWY9 1227 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 BCAP29Q9UHQ4 241 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 NFU1Q9UMS0 254 aa9.99□□□□□ -0.81
XCR1-201ENST00000309285 POTEB3A0JP26 581 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 POTECB2RU33 542 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 MAN1A1P33908 653 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 SERPINB6P35237 376 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 NAA35Q5VZE5 725 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 POTEBQ6S5H4 581 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 DCAF4Q8WV16 495 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 FAM163AQ96GL9 167 aaPredicted RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 NDST4Q9H3R1 872 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 RIC8AQ9NPQ8 531 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 ARMCX3Q9UH62 379 aaPredicted RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 ATP8A1Q9Y2Q0 1164 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 ZRANB2O95218 330 aaKnown RBP eCLIP9.98□□□□□ -0.81
XCR1-201ENST00000309285 SLURP2P0DP57 97 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 RAP1GDS1P52306 607 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 EHHADHQ08426 723 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 MAN2A1Q16706 1144 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 ANKRD40Q6AI12 368 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 RSPH3Q86UC2 560 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 MMS19Q96T76 1030 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 ZNF277Q9NRM2 450 aaPredicted RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 LRP6O75581 1613 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 TRPA1O75762 1119 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 DLATP10515 647 aaKnown RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 ZNF18P17022 549 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 SLCO1A2P46721 670 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 CRY2Q49AN0 593 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 NT5DC1Q5TFE4 455 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 SCYL2Q6P3W7 929 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 PDXDC2PQ6P474 469 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 TAB3Q8N5C8 712 aaPredicted RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 DAGLBQ8NCG7 672 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 ANKS1AQ92625 1134 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 LSM14BQ9BX40 385 aaKnown RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 KCNQ5Q9NR82 932 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 MRPL11Q9Y3B7 192 aaKnown RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 RHOBTB3O94955 611 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 NR2F2P24468 414 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 STAT3P40763 770 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 KCNJ6P48051 423 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 POLR2FP61218 127 aaKnown RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 ZBED6P86452 979 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 BEND6Q5SZJ8 279 aaPredicted RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 CCDC125Q86Z20 511 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 CCDC13Q8IYE1 715 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 RHBDL2Q9NX52 303 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 CHCHD3Q9NX63 227 aaKnown RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 ATXN8OSP0DMR3 200 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 ST13P4Q8IZP2 240 aaPredicted RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 UBL4BQ8N7F7 174 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 RAD54LQ92698 747 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 BHMT2Q9H2M3 363 aa9.98□□□□□ -0.81
XCR1-201ENST00000309285 LIMA1Q9UHB6 759 aaKnown RBP9.98□□□□□ -0.81
XCR1-201ENST00000309285 GMNCA6NCL1 334 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 GIPC1O14908 333 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 NDUFB10O96000 172 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 XRCC5P13010 732 aaKnown RBP9.97□□□□□ -0.81
XCR1-201ENST00000309285 PHEXP78562 749 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 SFMBT2Q5VUG0 894 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 RETREG2Q8NC44 543 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 PIP4K2CQ8TBX8 421 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 DCPSQ96C86 337 aaKnown RBP9.97□□□□□ -0.81
XCR1-201ENST00000309285 APOL6Q9BWW8 343 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 Q9H521 79 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 EMILIN3Q9NT22 766 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 CCPG1Q9ULG6 757 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 ATF5Q9Y2D1 282 aaPredicted RBP9.97□□□□□ -0.81
XCR1-201ENST00000309285 SLIT2O94813 1529 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 SLC37A4O43826 429 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 BCRP11274 1271 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 SMARCA1P28370 1054 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 FAM83BQ5T0W9 1011 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 PPP1R18Q6NYC8 613 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 LONP2Q86WA8 852 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 CYTH2Q99418 400 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 NUP98P52948 1817 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 PVALEFA0A1B0GWK0 134 aa9.97□□□□□ -0.81
XCR1-201ENST00000309285 POTEFA5A3E0 1075 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms