RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 GOLGA6L6A8MZA4 724 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 DDX39AO00148 427 aaKnown RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 HAS3O00219 553 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 LGR5O75473 907 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 BMP15O95972 392 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 RPN1P04843 607 aaKnown RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 LGALS2P05162 132 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 OR52Z1P0C646 297 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 FOSL1P15407 271 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 TCF7P36402 384 aaPredicted RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 PRPHP41219 470 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 CASP2P42575 452 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 ZNF132P52740 706 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 ATP2C1P98194 919 aaPredicted RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 SNX17Q15036 470 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 ARL6IP4Q66PJ3 421 aaKnown RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 FAM173BQ6P4H8 233 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 MYRIPQ8NFW9 859 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 MRFAP1L1Q96HT8 127 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 PCYT2Q99447 389 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 MTG1Q9BT17 334 aaPredicted RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 SENP6Q9GZR1 1112 aaPredicted RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 UNC45AQ9H3U1 944 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 C11orf49Q9H6J7 331 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 TTC12Q9H892 705 aaPredicted RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 CD248Q9HCU0 757 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 MORC2Q9Y6X9 1032 aaPredicted RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 KAT6AQ92794 2004 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 GRIN2DO15399 1336 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 TCHHQ07283 1943 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 WDR64B1ANS9 1081 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 H3BRB1 525 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 TNRC18O15417 2968 aaPredicted RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 SLC26A4O43511 780 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 MYL3P08590 195 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 SUPT20HL2P0C7V6 817 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 TXKP42681 527 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 RGS19P49795 217 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 SLC26A2P50443 739 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 JAK3P52333 1124 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 NUCB2P80303 420 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 SP4Q02446 784 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 PDIA5Q14554 519 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 PTPAQ15257 358 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 ATL3Q6DD88 541 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 CCDC73Q6ZRK6 1079 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 PLPPR4Q7Z2D5 763 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 AFAP1L1Q8TED9 768 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 FERMT2Q96AC1 680 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 KATNAL1Q9BW62 490 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 SMARCAD1Q9H4L7 1026 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 TUT1Q9H6E5 874 aaKnown RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 SUDS3Q9H7L9 328 aaPredicted RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 STARD7Q9NQZ5 370 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 DISC1Q9NRI5 854 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 CEP131Q9UPN4 1083 aa9.16□□□□□ -0.94
CHD6-201ENST00000309279 MRPS23Q9Y3D9 190 aaKnown RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 MAFBQ9Y5Q3 323 aaPredicted RBP9.16□□□□□ -0.94
CHD6-201ENST00000309279 A0A1W2PRQ8 180 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 EML1O00423 815 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 LZTS3O60299 673 aaPredicted RBP9.15□□□□□ -0.94
CHD6-201ENST00000309279 PSAPP07602 524 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 ZNF286BP0CG31 522 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 TSPAN7P41732 249 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 NASPP49321 788 aaPredicted RBP9.15□□□□□ -0.94
CHD6-201ENST00000309279 CDK7P50613 346 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 FXR2P51116 673 aaKnown RBP eCLIP9.15□□□□□ -0.948e-7■■□□□ 13.9
CHD6-201ENST00000309279 STAT5BP51692 787 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 NAP1L1P55209 391 aaKnown RBP9.15□□□□□ -0.94
CHD6-201ENST00000309279 ZBED6P86452 979 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 FANCCQ00597 558 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 ITGA7Q13683 1181 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 ELOAQ14241 798 aaKnown RBP9.15□□□□□ -0.94
CHD6-201ENST00000309279 TAF11Q15544 211 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 IL17AQ16552 155 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 HSP90B2PQ58FF3 399 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 KLHL10Q6JEL2 608 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 PPP4R4Q6NUP7 873 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 MIS18BP1Q6P0N0 1132 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 NFRKBQ6P4R8 1299 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 SLC39A5Q6ZMH5 540 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 LCA5Q86VQ0 697 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 CCDC60Q8IWA6 550 aaPredicted RBP9.15□□□□□ -0.94
CHD6-201ENST00000309279 IGSF22Q8N9C0 903 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 RNPC3Q96LT9 517 aaKnown RBP9.15□□□□□ -0.94
CHD6-201ENST00000309279 IPO9Q96P70 1041 aaKnown RBP9.15□□□□□ -0.94
CHD6-201ENST00000309279 USP28Q96RU2 1077 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 PRM3Q9NNZ6 103 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 ERAP1Q9NZ08 941 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 IP6K2Q9UHH9 426 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 ZNF215Q9UL58 517 aaPredicted RBP9.15□□□□□ -0.94
CHD6-201ENST00000309279 SAMM50Q9Y512 469 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 CLIC4Q9Y696 253 aa9.15□□□□□ -0.94
CHD6-201ENST00000309279 ALPK3Q96L96 1907 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 ARVCFO00192 962 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 ATP4AP20648 1035 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 TECP42680 631 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 MDM2Q00987 491 aaPredicted RBP9.14□□□□□ -0.95
CHD6-201ENST00000309279 SLC39A14Q15043 492 aa9.14□□□□□ -0.95
CHD6-201ENST00000309279 EPHA7Q15375 998 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms