RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 CLSTN2Q9H4D0 955 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 PPP1R1BQ9UD71 204 aaPredicted RBP1.42□□□□□ -2.18
CEP290-201ENST00000309041 KLF15Q9UIH9 416 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 RNF114Q9Y508 228 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 PLEKHG2Q9H7P9 1386 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 CXorf51AA0A1B0GTR3 108 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 A8MUI8 341 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 WDR64B1ANS9 1081 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 PALMO75781 387 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 PCK1P35558 622 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 ID4P47928 161 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 GPLD1P80108 840 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 GAGE2BQ13066 116 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 GAGE5Q13069 117 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 GAGE6Q13070 117 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 ZNF211Q13398 564 aaPredicted RBP1.42□□□□□ -2.18
CEP290-201ENST00000309041 GPR50Q13585 617 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 TOMM20Q15388 145 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 ARHGAP11BQ3KRB8 267 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 GAGE2EQ4V326 116 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 SEZ6Q53EL9 994 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 C19orf54Q5BKX5 351 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 PDSS1Q5T2R2 415 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 GAGE2AQ6NT46 116 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 ARHGAP11AQ6P4F7 1023 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 RSBN1LQ6PCB5 846 aaPredicted RBP1.42□□□□□ -2.18
CEP290-201ENST00000309041 C4orf50Q6ZRC1 276 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 BPHLQ86WA6 291 aaPredicted RBP1.42□□□□□ -2.18
CEP290-201ENST00000309041 TIGD4Q8IY51 512 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 TTC30BQ8N4P2 665 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 FRMD1Q8N878 549 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 GPT2Q8TD30 523 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 RLN3Q8WXF3 142 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 SMARCE1Q969G3 411 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 CLIP3Q96DZ5 547 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 AGBL1Q96MI9 1066 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 LRRC3BQ96PB8 259 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 FAM117AQ9C073 453 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 NDFIP2Q9NV92 336 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 GAGE2DQ9UEU5 116 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 USP20Q9Y2K6 914 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 HYOU1Q9Y4L1 999 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 LOC102724159A0A0B4J2E5 919 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 FAM159BA6NKW6 160 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 A6NL46 340 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 POC1B-GALNT4F8VUJ3 575 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 SGTAO43765 313 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 CCNDBP1O95273 360 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 PRKCBP05771 671 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 HLA-DOAP06340 250 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 GJB1P08034 283 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 PEX5P50542 639 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 STK38Q15208 465 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 PWP2Q15269 919 aaKnown RBP1.42□□□□□ -2.18
CEP290-201ENST00000309041 SLC9C1Q4G0N8 1177 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 TBC1D9BQ66K14 1250 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 CFAP77Q6ZQR2 320 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 SLC22A15Q8IZD6 547 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 SMARCC2Q8TAQ2 1214 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 GSDMBQ8TAX9 411 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 SPIRE2Q8WWL2 714 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 AKAP1Q92667 903 aaKnown RBP eCLIP1.42□□□□□ -2.18
CEP290-201ENST00000309041 TAF4BQ92750 862 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 CHFRQ96EP1 664 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 SLC41A2Q96JW4 573 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 SYT3Q9BQG1 590 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 IRF2BPLQ9H1B7 796 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 SAYSD1Q9NPB0 183 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 EHD2Q9NZN4 543 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 ZMAT5Q9UDW3 170 aaKnown RBP1.42□□□□□ -2.18
CEP290-201ENST00000309041 FBXO2Q9UK22 296 aaPredicted RBP1.42□□□□□ -2.18
CEP290-201ENST00000309041 SYNPO2Q9UMS6 1093 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 PLEKHM1Q9Y4G2 1056 aa1.42□□□□□ -2.18
CEP290-201ENST00000309041 NUP153P49790 1475 aaKnown RBP1.42□□□□□ -2.18
CEP290-201ENST00000309041 ESPNB1AK53 854 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 C2CD4DB7Z1M9 353 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SPOPO43791 374 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 DTNBO60941 627 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SLU7O95391 586 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 HTR2AP28223 471 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 HTR2BP41595 481 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 AP3M2P53677 418 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 LRRC41Q15345 812 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 DHCR24Q15392 516 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 VARS2Q5ST30 1063 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 DAB2IPQ5VWQ8 1189 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CHADLQ6NUI6 762 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PRPF39Q86UA1 669 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 TMEM135Q86UB9 458 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PDCL2Q8N4E4 241 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TC2NQ8N9U0 490 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 KLHL23Q8NBE8 558 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 RNF214Q8ND24 703 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 WDR66Q8TBY9 1149 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SNX19Q92543 992 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CDK15Q96Q40 435 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CDADC1Q9BWV3 514 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PPARGC1AQ9UBK2 798 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 CAPN11Q9UMQ6 739 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TRPC6Q9Y210 931 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms