RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 PLEKHG4Q58EX7 1191 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 C16orf59Q7L2K0 433 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ZNF410Q86VK4 478 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 DBF4BQ8NFT6 615 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SLC9A7Q96T83 725 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 MMTAG2Q9BU76 263 aaKnown RBP12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 GCOM2Q9BZD3 368 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CSRNP2Q9H175 543 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 FBXO2Q9UK22 296 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 COL4A3BPQ9Y5P4 624 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SLC4A7Q9Y6M7 1214 aa12.23□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 A0A087WWV3 80 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 E9PMD0 336 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 GPR182O15218 404 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ASAP2O43150 1006 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 GPR32O75388 356 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SSBP05455 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CD52P31358 61 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 GRIN1Q05586 938 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 NFX1Q12986 1120 aaKnown RBP12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 DRP2Q13474 957 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 TFDP1Q14186 410 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 MXD4Q14582 209 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 GPNMBQ14956 572 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 HABP4Q5JVS0 413 aaKnown RBP12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 HYIQ5T013 277 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PADI6Q6TGC4 694 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 MAEAQ7L5Y9 396 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SYMPKQ92797 1274 aaKnown RBP12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 TMEM143Q96AN5 459 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ZNF668Q96K58 619 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CLIC6Q96NY7 704 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PLIN2Q99541 437 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 FTHL17Q9BXU8 183 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 INO80BQ9C086 356 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CCSER1Q9C0I3 900 aa12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 POLR3FQ9H1D9 316 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 A0A087WZ62 844 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 CUTAO60888 179 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 AMHP03971 560 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PLCG1P19174 1290 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SFPQP23246 707 aaKnown RBP eCLIP12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PHKA2P46019 1235 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 ME1P48163 572 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 WDR5P61964 334 aaKnown RBP12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 GRB10Q13322 594 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 KARSQ15046 597 aaKnown RBP12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 LRIT3Q3SXY7 679 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 TMEM119Q4V9L6 283 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SPECC1Q5M775 1068 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 FAM102BQ5T8I3 360 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 SPATA32Q96LK8 384 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 XPNPEP1Q9NQW7 623 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 PADI3Q9ULW8 664 aa12.21□□□□□ -0.45
CSPG4P2Y-201ENST00000306853 NLRC5Q86WI3 1866 aa12.21□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 DENND3A2RUS2 1198 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PLA2G4BP0C869 781 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 SRGAP2CP0DJJ0 459 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 DARSP14868 501 aaKnown RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ATP2A2P16615 1042 aaKnown RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 CYP11B2P19099 503 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 EIF4BP23588 611 aaKnown RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 LAMTOR4Q0VGL1 99 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PPP2R5AQ15172 486 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RASIP1Q5U651 963 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RRAGBQ5VZM2 374 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 FAM43BQ6ZT52 329 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 FAM228AQ86W67 206 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 MYOCDQ8IZQ8 938 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 RNF149Q8NC42 400 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 TMEM40Q8WWA1 233 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PRPF31Q8WWY3 499 aaKnown RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 VWCEQ96DN2 955 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 EPSTI1Q96J88 318 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 IFT74Q96LB3 600 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 PNMA5Q96PV4 448 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 TIPINQ9BVW5 301 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ADAMTS10Q9H324 1103 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 AGO3Q9H9G7 860 aaKnown RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 CDHR5Q9HBB8 845 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ERVK-5Q9HDB9 667 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 CXXC1Q9P0U4 656 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 STK17AQ9UEE5 414 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ZDHHC9Q9Y397 364 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 NOC2LQ9Y3T9 749 aaKnown RBP12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 TTC3P53804 2025 aa12.2□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 LRRIQ4A6NIV6 560 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 ERLIN2O94905 339 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 STAT6P42226 847 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 SMAD3P84022 425 aaKnown RBP12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 CCDC73Q6ZRK6 1079 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 CATSPER4Q7RTX7 472 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 KCNK18Q7Z418 384 aa12.19□□□□□ -0.46
CSPG4P2Y-201ENST00000306853 SRGAP1Q7Z6B7 1085 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms