RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 CYP4F22Q6NT55 531 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 BANK1Q8NDB2 785 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 HOOK2Q96ED9 719 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 NFKBIEO00221 500 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 EPB41P11171 864 aaKnown RBP15.82■□□□□ 0.12
PTPN9-201ENST00000306726 EEF2P13639 858 aaKnown RBP15.82■□□□□ 0.12
PTPN9-201ENST00000306726 NCAPGQ9BPX3 1015 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 HEMGNQ9BXL5 484 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 INTS9Q9NV88 658 aaKnown RBP15.82■□□□□ 0.12
PTPN9-201ENST00000306726 USP40Q9NVE5 1235 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 CAND2O75155 1236 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 AARSP49588 968 aaKnown RBP eCLIP15.82■□□□□ 0.12
PTPN9-201ENST00000306726 ANKS1AQ92625 1134 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 ERGIC2Q96RQ1 377 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 FMO2Q99518 471 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 SIK3Q9Y2K2 1263 aa15.82■□□□□ 0.12
PTPN9-201ENST00000306726 COG2Q14746 738 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 SNCBQ16143 134 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 MEA1Q16626 185 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 KCNV1Q6PIU1 500 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 ADGRF4Q8IZF3 695 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 CUL5Q93034 780 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 LAMA4Q16363 1823 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 WDR91A4D1P6 747 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 HARSP12081 509 aaKnown RBP15.81■□□□□ 0.12
PTPN9-201ENST00000306726 CIAPIN1Q6FI81 312 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 HHIPL2Q6UWX4 724 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 ARHGAP27Q6ZUM4 889 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 HVCN1Q96D96 273 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 PRMT1Q99873 361 aaKnown RBP15.81■□□□□ 0.12
PTPN9-201ENST00000306726 ZNF277Q9NRM2 450 aaPredicted RBP15.81■□□□□ 0.12
PTPN9-201ENST00000306726 SHBGP04278 402 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 SLC18A3Q16572 532 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 SPRED3Q2MJR0 410 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 PPM1KQ8N3J5 372 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 USP38Q8NB14 1042 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 DAAM1Q9Y4D1 1078 aa15.81■□□□□ 0.12
PTPN9-201ENST00000306726 A0A1W2PRG0 241 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 IFI35P80217 286 aaPredicted RBP15.8■□□□□ 0.12
PTPN9-201ENST00000306726 RUFY4Q6ZNE9 571 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 RAPGEF5Q92565 580 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 DBNDD1Q9H9R9 158 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 PLCB1Q9NQ66 1216 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 KRT5P13647 590 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 UCHL3P15374 230 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 GALCP54803 685 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 DACT2Q5SW24 774 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 SYCP2LQ5T4T6 812 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 CPXCR1Q8N123 301 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 GUF1Q8N442 669 aaKnown RBP15.8■□□□□ 0.12
PTPN9-201ENST00000306726 SEC16BQ96JE7 1060 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 C7orf25Q9BPX7 421 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 CNOT8Q9UFF9 292 aaKnown RBP15.8■□□□□ 0.12
PTPN9-201ENST00000306726 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTPN9-201ENST00000306726 ORC4O43929 436 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 EVI5O60447 810 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 VIL1P09327 827 aaKnown RBP15.8■□□□□ 0.12
PTPN9-201ENST00000306726 PLCB3Q01970 1234 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 LONRF1Q17RB8 773 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 DAB2IPQ5VWQ8 1189 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 CENPPQ6IPU0 288 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 RSBN1LQ6PCB5 846 aaPredicted RBP15.8■□□□□ 0.12
PTPN9-201ENST00000306726 C1orf54Q8WWF1 131 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 POP1Q99575 1024 aaKnown RBP15.8■□□□□ 0.12
PTPN9-201ENST00000306726 GRIN2DO15399 1336 aa15.8■□□□□ 0.12
PTPN9-201ENST00000306726 PPP4CP60510 307 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 SMAD1Q15797 465 aaKnown RBP15.79■□□□□ 0.12
PTPN9-201ENST00000306726 UAP1Q16222 522 aaPredicted RBP15.79■□□□□ 0.12
PTPN9-201ENST00000306726 RFX8Q6ZV50 586 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 ANKS4BQ8N8V4 417 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 CEP72Q9P209 647 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 TISP43B9A030 160 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 AFPP02771 609 aaKnown RBP15.79■□□□□ 0.12
PTPN9-201ENST00000306726 CHN1P15882 459 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 KAZNQ674X7 775 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 NUGGCQ68CJ6 796 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 GSTA5Q7RTV2 222 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 CCDC63Q8NA47 563 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 SLC17A8Q8NDX2 589 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 EPS8L3Q8TE67 593 aaKnown RBP15.79■□□□□ 0.12
PTPN9-201ENST00000306726 BAP1Q92560 729 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 TEKT1Q969V4 418 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 AK8Q96MA6 479 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 PWWP2AQ96N64 755 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 DDX20Q9UHI6 824 aaKnown RBP15.79■□□□□ 0.12
PTPN9-201ENST00000306726 ELOA2Q8IYF1 753 aaPredicted RBP15.79■□□□□ 0.12
PTPN9-201ENST00000306726 GAKO14976 1311 aa15.79■□□□□ 0.12
PTPN9-201ENST00000306726 DICER1Q9UPY3 1922 aaKnown RBP15.78■□□□□ 0.12
PTPN9-201ENST00000306726 GCLMP48507 274 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 PPP2R2AP63151 447 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 DR1Q01658 176 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 SLC29A2Q14542 456 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 CDC37Q16543 378 aaPredicted RBP15.78■□□□□ 0.12
PTPN9-201ENST00000306726 CPNE8Q86YQ8 564 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 SLC30A5Q8TAD4 765 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 TTYH3Q9C0H2 523 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 MED24O75448 989 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 ZNF449Q6P9G9 518 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 OGFOD1Q8N543 542 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 PRCCQ92733 491 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 259.1 ms