RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 ERMNQ8TAM6 284 aa17.58■□□□□ 0.41
LONRF3-201ENST00000304778 IFT81Q8WYA0 676 aa17.58■□□□□ 0.41
LONRF3-201ENST00000304778 SLC40A1Q9NP59 571 aa17.58■□□□□ 0.41
LONRF3-201ENST00000304778 EMILIN3Q9NT22 766 aa17.58■□□□□ 0.41
LONRF3-201ENST00000304778 PHF20L1A8MW92 1017 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 PLA2G6O60733 806 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 FTCDO95954 541 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 POLD1P28340 1107 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 EPS15P42566 896 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 KLHL30Q0D2K2 578 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 ARSHQ5FYA8 562 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 MEI1Q5TIA1 1274 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 FAM133AQ8N9E0 248 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 ZNF341Q9BYN7 854 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 FEM1BQ9UK73 627 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 VAV3Q9UKW4 847 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 PITPNM2Q9BZ72 1349 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 IGLV3-22A0A075B6J6 115 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 BACH1O14867 736 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 GLI1P08151 1106 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 RPA1P27694 616 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 CDR1P51861 262 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 UBXN2AP68543 259 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 ASIC2Q16515 512 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 PTPROQ16827 1216 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 KIRREL3Q8IZU9 778 aa17.58■□□□□ 0.4
LONRF3-201ENST00000304778 INPP4AQ96PE3 977 aaPredicted RBP17.58■□□□□ 0.4
LONRF3-201ENST00000304778 DDX20Q9UHI6 824 aaKnown RBP17.58■□□□□ 0.4
LONRF3-201ENST00000304778 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.58■□□□□ 0.4
LONRF3-201ENST00000304778 HEXIM1O94992 359 aaKnown RBP17.57■□□□□ 0.4
LONRF3-201ENST00000304778 CARSP49589 748 aaKnown RBP17.57■□□□□ 0.4
LONRF3-201ENST00000304778 ARID5AQ03989 594 aa17.57■□□□□ 0.4
LONRF3-201ENST00000304778 IFT88Q13099 833 aa17.57■□□□□ 0.4
LONRF3-201ENST00000304778 ADAM9Q13443 819 aa17.57■□□□□ 0.4
LONRF3-201ENST00000304778 KIAA0753Q2KHM9 967 aa17.57■□□□□ 0.4
LONRF3-201ENST00000304778 SLC30A10Q6XR72 485 aa17.57■□□□□ 0.4
LONRF3-201ENST00000304778 RNPC3Q96LT9 517 aaKnown RBP17.57■□□□□ 0.4
LONRF3-201ENST00000304778 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.57■□□□□ 0.4
LONRF3-201ENST00000304778 WDR18Q9BV38 432 aa17.57■□□□□ 0.4
LONRF3-201ENST00000304778 MRPL11Q9Y3B7 192 aaKnown RBP17.57■□□□□ 0.4
LONRF3-201ENST00000304778 CLNS1AP54105 237 aaKnown RBP17.57■□□□□ 0.4
LONRF3-201ENST00000304778 BIRC2Q13490 618 aa17.57■□□□□ 0.4
LONRF3-201ENST00000304778 LDHDQ86WU2 507 aa17.57■□□□□ 0.4
LONRF3-201ENST00000304778 TEPSINQ96N21 525 aa17.57■□□□□ 0.4
LONRF3-201ENST00000304778 ADAMTS1Q9UHI8 967 aa17.57■□□□□ 0.4
LONRF3-201ENST00000304778 NFU1Q9UMS0 254 aa17.57■□□□□ 0.4
LONRF3-201ENST00000304778 CETN3O15182 167 aa17.56■□□□□ 0.4
LONRF3-201ENST00000304778 CLSTN1O94985 981 aa17.56■□□□□ 0.4
LONRF3-201ENST00000304778 KRT18P05783 430 aaKnown RBP17.56■□□□□ 0.4
LONRF3-201ENST00000304778 LSP1P33241 339 aa17.56■□□□□ 0.4
LONRF3-201ENST00000304778 ZNF280AP59817 542 aaPredicted RBP17.56■□□□□ 0.4
LONRF3-201ENST00000304778 CYP4A11Q02928 519 aa17.56■□□□□ 0.4
LONRF3-201ENST00000304778 KCNH2Q12809 1159 aa17.56■□□□□ 0.4
LONRF3-201ENST00000304778 SF3A3Q12874 501 aaKnown RBP eCLIP17.56■□□□□ 0.4
LONRF3-201ENST00000304778 PAK2Q13177 524 aa17.56■□□□□ 0.4
LONRF3-201ENST00000304778 PABPC4Q13310 644 aaKnown RBP eCLIP17.56■□□□□ 0.4
LONRF3-201ENST00000304778 CRYMQ14894 314 aa17.56■□□□□ 0.4
LONRF3-201ENST00000304778 YTHDF3Q7Z739 585 aaKnown RBP17.56■□□□□ 0.4
LONRF3-201ENST00000304778 PACSIN1Q9BY11 444 aa17.56■□□□□ 0.4
LONRF3-201ENST00000304778 TRIM6Q9C030 488 aaPredicted RBP17.56■□□□□ 0.4
LONRF3-201ENST00000304778 PACSIN2Q9UNF0 486 aaPredicted RBP17.56■□□□□ 0.4
LONRF3-201ENST00000304778 DNM3Q9UQ16 869 aa17.56■□□□□ 0.4
LONRF3-201ENST00000304778 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
LONRF3-201ENST00000304778 EML1O00423 815 aa17.56■□□□□ 0.4
LONRF3-201ENST00000304778 ZNF473Q8WTR7 871 aaKnown RBP17.56■□□□□ 0.4
LONRF3-201ENST00000304778 ASTN2O75129 1339 aaPredicted RBP17.56■□□□□ 0.4
LONRF3-201ENST00000304778 TMCO5BA8MYB1 307 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 NR2F2P24468 414 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 FMNL3Q8IVF7 1028 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 CCDC43Q96MW1 224 aaKnown RBP17.55■□□□□ 0.4
LONRF3-201ENST00000304778 ZHX3Q9H4I2 956 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 EPB41L5Q9HCM4 733 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 FAM170AA1A519 330 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 A6NNZ2 444 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 BTNL10A8MVZ5 291 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 PTGER2P43116 358 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 GUCY2DQ02846 1103 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 TUBB8Q3ZCM7 444 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 SAMD7Q7Z3H4 446 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 SYT2Q8N9I0 419 aaPredicted RBP17.55■□□□□ 0.4
LONRF3-201ENST00000304778 AGBL1Q96MI9 1066 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 EIF2AK1Q9BQI3 630 aaKnown RBP17.55■□□□□ 0.4
LONRF3-201ENST00000304778 MTFR1LQ9H019 292 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 EPN3Q9H201 632 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 CALRP27797 417 aaKnown RBP17.55■□□□□ 0.4
LONRF3-201ENST00000304778 E2F5Q15329 346 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 SNCBQ16143 134 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 MREGQ8N565 214 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 RGL1Q9NZL6 768 aa17.55■□□□□ 0.4
LONRF3-201ENST00000304778 CASP5P51878 434 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 DGKZQ13574 1117 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 GIT2Q14161 759 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 ENOX2Q16206 610 aaKnown RBP17.54■□□□□ 0.4
LONRF3-201ENST00000304778 C10orf76Q5T2E6 689 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 DNAAF5Q86Y56 855 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 CCDC114Q96M63 670 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 SCLT1Q96NL6 688 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 KRT12Q99456 494 aa17.54■□□□□ 0.4
LONRF3-201ENST00000304778 PLCB1Q9NQ66 1216 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms