RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 COPB2P35606 906 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 RTP1P59025 263 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 STXBP2Q15833 593 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 ASIC2Q16515 512 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 XKR9Q5GH70 373 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 TREML2Q5T2D2 321 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 C9orf131Q5VYM1 1079 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 SPIRE2Q8WWL2 714 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 SYT17Q9BSW7 474 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 LACRTQ9GZZ8 138 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 SLC9A2Q9UBY0 812 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 KCNH4Q9UQ05 1017 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 ARID2Q68CP9 1835 aa21.25■□□□□ 0.99
HOXC4-201ENST00000303406 RCCD1A6NED2 376 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 STBD1O95210 358 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 UCHL3P15374 230 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 H2AFXP16104 143 aaPredicted RBP21.24■□□□□ 0.99
HOXC4-201ENST00000303406 ABCD1P33897 745 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 MAGEA1P43355 309 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 TCERG1LQ5VWI1 586 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 PAPD7Q5XG87 772 aaKnown RBP21.24■□□□□ 0.99
HOXC4-201ENST00000303406 ABHD15Q6UXT9 468 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 FMNL3Q8IVF7 1028 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 GOLGA1Q92805 767 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 KIFAP3Q92845 792 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 SECISBP2LQ93073 1101 aaKnown RBP21.24■□□□□ 0.99
HOXC4-201ENST00000303406 TRIM10Q9UDY6 481 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.24■□□□□ 0.99
HOXC4-201ENST00000303406 EXOC7Q9UPT5 735 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 V9GYY5 206 aaPredicted RBP21.24■□□□□ 0.99
HOXC4-201ENST00000303406 ZC3H4Q9UPT8 1303 aaKnown RBP21.24■□□□□ 0.99
HOXC4-201ENST00000303406 SLC9A1P19634 815 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 PRKCIP41743 596 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 CYP27A1Q02318 531 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 PPIL2Q13356 520 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 DPY19L2Q6NUT2 758 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 MIS18BP1Q6P0N0 1132 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 ANO5Q75V66 913 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 TRAPPC11Q7Z392 1133 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 HAUS6Q7Z4H7 955 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 GPR161Q8N6U8 529 aaKnown RBP21.24■□□□□ 0.99
HOXC4-201ENST00000303406 TRIM58Q8NG06 486 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 RABGGTAQ92696 567 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 KCNN1Q92952 543 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 SIX2Q9NPC8 291 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 GABBR1Q9UBS5 961 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 KCNG1Q9UIX4 513 aa21.24■□□□□ 0.99
HOXC4-201ENST00000303406 IGSF9BQ9UPX0 1349 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 P4HA2O15460 535 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 EDNRBP24530 442 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 FMO5P49326 533 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 SMTNP53814 917 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 JAM2P57087 298 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 RAPGEF1Q13905 1077 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 TDRD12Q587J7 1177 aaKnown RBP21.23■□□□□ 0.99
HOXC4-201ENST00000303406 C10orf76Q5T2E6 689 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 INTS8Q75QN2 995 aaKnown RBP21.23■□□□□ 0.99
HOXC4-201ENST00000303406 ANKRD35Q8N283 1001 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 RNF10Q8N5U6 811 aaKnown RBP21.23■□□□□ 0.99
HOXC4-201ENST00000303406 MCPH1Q8NEM0 835 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 CDCA5Q96FF9 252 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 NTPCRQ9BSD7 190 aaKnown RBP21.23■□□□□ 0.99
HOXC4-201ENST00000303406 SPATC1LQ9H0A9 340 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 GCNT4Q9P109 453 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 BTBD7Q9P203 1132 aa21.23■□□□□ 0.99
HOXC4-201ENST00000303406 EXOC3O60645 756 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 N4BP1O75113 896 aaKnown RBP21.22■□□□□ 0.99
HOXC4-201ENST00000303406 TACC1O75410 805 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 DGAT1O75907 488 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 ATG7O95352 703 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 SLC25A27O95847 323 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 SUPT20HL2P0C7V6 817 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 SCP2P22307 547 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 RFX1P22670 979 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 ALDH5A1P51649 535 aaPredicted RBP21.22■□□□□ 0.99
HOXC4-201ENST00000303406 ACTR2P61160 394 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 KLHL30Q0D2K2 578 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 BFSP1Q12934 665 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 SLC18A3Q16572 532 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 KSR1Q8IVT5 923 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 VTI1AQ96AJ9 217 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 SPAG5Q96R06 1193 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 PDLIM7Q9NR12 457 aa21.22■□□□□ 0.99
HOXC4-201ENST00000303406 GOLGB1Q14789 3259 aaKnown RBP21.21■□□□□ 0.99
HOXC4-201ENST00000303406 PMM2O15305 246 aa21.21■□□□□ 0.99
HOXC4-201ENST00000303406 ZNF862O60290 1169 aa21.21■□□□□ 0.99
HOXC4-201ENST00000303406 KRT13P13646 458 aa21.21■□□□□ 0.99
HOXC4-201ENST00000303406 YBX3P16989 372 aaKnown RBP eCLIP21.21■□□□□ 0.99
HOXC4-201ENST00000303406 CYP2J2P51589 502 aa21.21■□□□□ 0.99
HOXC4-201ENST00000303406 IRX3P78415 501 aaPredicted RBP21.21■□□□□ 0.99
HOXC4-201ENST00000303406 ENPEPQ07075 957 aa21.21■□□□□ 0.99
HOXC4-201ENST00000303406 XKR3Q5GH77 459 aa21.21■□□□□ 0.99
HOXC4-201ENST00000303406 PLA2G4FQ68DD2 849 aa21.21■□□□□ 0.99
HOXC4-201ENST00000303406 GADL1Q6ZQY3 521 aa21.21■□□□□ 0.99
HOXC4-201ENST00000303406 ELP3Q9H9T3 547 aa21.21■□□□□ 0.99
HOXC4-201ENST00000303406 AGTPBP1Q9UPW5 1226 aa21.21■□□□□ 0.99
HOXC4-201ENST00000303406 FHOD1Q9Y613 1164 aa21.21■□□□□ 0.99
HOXC4-201ENST00000303406 H0YCG3 227 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 POTEB2H3BUK9 544 aa21.2■□□□□ 0.98
HOXC4-201ENST00000303406 GFPT2O94808 682 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms