RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 DDX47Q9H0S4 455 aaKnown RBP22.56■■□□□ 1.2
LETM1-201ENST00000302787 FIS1Q9Y3D6 152 aa22.56■■□□□ 1.2
LETM1-201ENST00000302787 USP31Q70CQ4 1352 aa22.56■■□□□ 1.2
LETM1-201ENST00000302787 ABCB11O95342 1321 aa22.56■■□□□ 1.2
LETM1-201ENST00000302787 CHD1O14646 1710 aa22.56■■□□□ 1.2
LETM1-201ENST00000302787 SLC16A4O15374 487 aa22.56■■□□□ 1.2
LETM1-201ENST00000302787 CASP2P42575 452 aa22.56■■□□□ 1.2
LETM1-201ENST00000302787 PDXDC1Q6P996 788 aa22.56■■□□□ 1.2
LETM1-201ENST00000302787 NCF2P19878 526 aaPredicted RBP22.56■■□□□ 1.2
LETM1-201ENST00000302787 CCZ1BP86790 482 aa22.56■■□□□ 1.2
LETM1-201ENST00000302787 CCZ1P86791 482 aaPredicted RBP22.56■■□□□ 1.2
LETM1-201ENST00000302787 MCPH1Q8NEM0 835 aa22.56■■□□□ 1.2
LETM1-201ENST00000302787 KIAA1586Q9HCI6 787 aa22.56■■□□□ 1.2
LETM1-201ENST00000302787 DCTN3O75935 186 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 Q3C1V9 767 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 ZNF667Q5HYK9 610 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 PASD1Q8IV76 773 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 ZNF564Q8TBZ8 553 aaPredicted RBP22.55■■□□□ 1.2
LETM1-201ENST00000302787 AP5M1Q9H0R1 490 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 LIMA1Q9UHB6 759 aaKnown RBP22.55■■□□□ 1.2
LETM1-201ENST00000302787 PACSIN2Q9UNF0 486 aaPredicted RBP22.55■■□□□ 1.2
LETM1-201ENST00000302787 REREQ9P2R6 1566 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 SETBP1Q9Y6X0 1596 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 FAM196BA6NMK8 535 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 ZNF18P17022 549 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 ZNF394Q53GI3 561 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 SRBD1Q8N5C6 995 aaKnown RBP22.55■■□□□ 1.2
LETM1-201ENST00000302787 NUP85Q9BW27 656 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 RASA4BC9J798 803 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 RASA4O43374 803 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 RPAINQ86UA6 219 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 STAG2Q8N3U4 1231 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 ANGPTL2Q9UKU9 493 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 WDR64B1ANS9 1081 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 TTI1O43156 1089 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 VAMP7P51809 220 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 CAV1Q03135 178 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 ANKRD40Q6AI12 368 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 THNSL1Q8IYQ7 743 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 THOC1Q96FV9 657 aaKnown RBP22.55■■□□□ 1.2
LETM1-201ENST00000302787 TAF1DQ9H5J8 278 aaPredicted RBP22.55■■□□□ 1.2
LETM1-201ENST00000302787 TBC1D22BQ9NU19 505 aa22.55■■□□□ 1.2
LETM1-201ENST00000302787 PPP2R2AP63151 447 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 RMDN3Q96TC7 470 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 FEM1BQ9UK73 627 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 ANGPTL3Q9Y5C1 460 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 BEND6Q5SZJ8 279 aaPredicted RBP22.54■■□□□ 1.2
LETM1-201ENST00000302787 KRT27Q7Z3Y8 459 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 TMEM35BQ8NCS4 154 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 THEGQ9P2T0 379 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 FAF1Q9UNN5 650 aaPredicted RBP22.54■■□□□ 1.2
LETM1-201ENST00000302787 SKIP12755 728 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 QRICH1Q2TAL8 776 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.54■■□□□ 1.2
LETM1-201ENST00000302787 MID2Q9UJV3 735 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 KRT37O76014 449 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 FAM84BQ96KN1 310 aaPredicted RBP22.54■■□□□ 1.2
LETM1-201ENST00000302787 NGRNQ9NPE2 291 aaKnown RBP22.54■■□□□ 1.2
LETM1-201ENST00000302787 PLEKHG2Q9H7P9 1386 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 A0A1B0GTH6 734 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 FAM213AQ9BRX8 229 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 KLC2Q9H0B6 622 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 SCOCQ9UIL1 159 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 INTUQ9ULD6 942 aa22.54■■□□□ 1.2
LETM1-201ENST00000302787 G3BP2Q9UN86 482 aaKnown RBP22.54■■□□□ 1.2
LETM1-201ENST00000302787 TADA3O75528 432 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 E4F1Q66K89 784 aaPredicted RBP22.53■■□□□ 1.2
LETM1-201ENST00000302787 TMEM270Q6UE05 265 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 ATP6V1E2Q96A05 226 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 TTC17Q96AE7 1141 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 NOC2LQ9Y3T9 749 aaKnown RBP22.53■■□□□ 1.2
LETM1-201ENST00000302787 ADGRB3O60242 1522 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 E2F4Q16254 413 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 CIAPIN1Q6FI81 312 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 C11orf70Q9BRQ4 267 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 SEL1LQ9UBV2 794 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 FMR1Q06787 632 aaKnown RBP eCLIP22.53■■□□□ 1.22e-6■■■■□ 19.6
LETM1-201ENST00000302787 ARMCX2Q7L311 632 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 NUDCD1Q96RS6 583 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 TDRD3Q9H7E2 651 aaKnown RBP22.53■■□□□ 1.2
LETM1-201ENST00000302787 A0A0G2JND7 137 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 TARSL2A2RTX5 802 aaKnown RBP22.53■■□□□ 1.2
LETM1-201ENST00000302787 GMNCA6NCL1 334 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 CHRNA3P32297 505 aa22.53■■□□□ 1.2
LETM1-201ENST00000302787 COPEO14579 308 aa22.52■■□□□ 1.2
LETM1-201ENST00000302787 CLDN3O15551 220 aa22.52■■□□□ 1.2
LETM1-201ENST00000302787 FTLP02792 175 aaPredicted RBP22.52■■□□□ 1.2
LETM1-201ENST00000302787 EPM2AIP1Q7L775 607 aaPredicted RBP22.52■■□□□ 1.2
LETM1-201ENST00000302787 SYT2Q8N9I0 419 aaPredicted RBP22.52■■□□□ 1.2
LETM1-201ENST00000302787 RAVER2Q9HCJ3 691 aaKnown RBP22.52■■□□□ 1.2
LETM1-201ENST00000302787 SLC12A6Q9UHW9 1150 aa22.52■■□□□ 1.2
LETM1-201ENST00000302787 MMP10P09238 476 aa22.52■■□□□ 1.2
LETM1-201ENST00000302787 TRIM28Q13263 835 aaKnown RBP22.52■■□□□ 1.2
LETM1-201ENST00000302787 FAM47EQ6ZV65 393 aa22.52■■□□□ 1.2
LETM1-201ENST00000302787 BZW1Q7L1Q6 419 aaKnown RBP22.52■■□□□ 1.2
LETM1-201ENST00000302787 RTKN2Q8IZC4 609 aa22.52■■□□□ 1.2
LETM1-201ENST00000302787 TTC13Q8NBP0 860 aa22.52■■□□□ 1.2
LETM1-201ENST00000302787 PHF20Q9BVI0 1012 aa22.52■■□□□ 1.2
LETM1-201ENST00000302787 LCMT1Q9UIC8 334 aa22.52■■□□□ 1.2
LETM1-201ENST00000302787 POLR1AO95602 1720 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms