RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PVALEFA0A1B0GWK0 134 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 EFCAB14O75071 495 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 ESRRBO95718 433 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 A1BGP04217 495 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 DDIT3P35638 169 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 HDLBPQ00341 1268 aaKnown RBP8.15□□□□□ -1.1
SF3B3-201ENST00000302516 TFDP2Q14188 446 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 NECTIN1Q15223 517 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 CCNYQ8ND76 341 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 PPP1R2P1Q96PQ5 205 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 KIF9Q9HAQ2 790 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 ERVV-1B6SEH8 477 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 HSPA2P54652 639 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 ITPRIPL1Q6GPH6 555 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 FRA10AC1Q70Z53 315 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 UIMC1Q96RL1 719 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 NUP85Q9BW27 656 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 ARL2BPQ9Y2Y0 163 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 APOA1P02647 267 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 GOLGA8FQ08AF8 430 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 GOLGA8DPQ0D2H9 430 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 BBS9Q3SYG4 887 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 TTC8Q8TAM2 541 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 ALKBH8Q96BT7 664 aaKnown RBP8.15□□□□□ -1.1
SF3B3-201ENST00000302516 IP6K2Q9UHH9 426 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 TRAF3IP3Q9Y228 551 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 NR3C1P04150 777 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 DNAL1Q4LDG9 190 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 FAM160B2Q86V87 743 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 SEPT3Q9UH03 358 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 XPAP23025 273 aaPredicted RBP8.15□□□□□ -1.11
SF3B3-201ENST00000302516 HSPA13P48723 471 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 TRIM60Q495X7 471 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 AGBL2Q5U5Z8 902 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 RSRC2Q7L4I2 434 aaKnown RBP8.15□□□□□ -1.11
SF3B3-201ENST00000302516 TERB1Q8NA31 727 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 CABLES1Q8TDN4 633 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 WWP1Q9H0M0 922 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 CCND1P24385 295 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 IL6STP40189 918 aaPredicted RBP8.15□□□□□ -1.11
SF3B3-201ENST00000302516 TNFAIP2Q03169 654 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 EFTUD2Q15029 972 aaKnown RBP eCLIP8.15□□□□□ -1.114e-10■■■□□ 15
SF3B3-201ENST00000302516 NCLNQ969V3 563 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 FAM167AQ96KS9 214 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 BLOC1S6Q9UL45 172 aa8.15□□□□□ -1.11
SF3B3-201ENST00000302516 SLC1A1P43005 524 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 STAT4Q14765 748 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 CNGA3Q16281 694 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 KYAT1Q16773 422 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 ABCC3O15438 1527 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 DLC1Q96QB1 1528 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 DYNLT1P63172 113 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 CYP4A11Q02928 519 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 NAALADL2Q58DX5 795 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 USP6NLQ92738 828 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 SUGCTQ9HAC7 445 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 ATP6V0A4Q9HBG4 840 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 PPIP5K2O43314 1243 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 DEAF1O75398 565 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-201ENST00000302516 GYG1P46976 350 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 INPP5AQ14642 412 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 RGS9BPQ6ZS82 235 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 ANKRD27Q96NW4 1050 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 GJA3Q9Y6H8 435 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 SMAPO00193 183 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 EIF3HO15372 352 aaKnown RBP eCLIP8.14□□□□□ -1.112e-6■■■□□ 17
SF3B3-201ENST00000302516 MEFVO15553 781 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-201ENST00000302516 ENAHQ8N8S7 591 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-201ENST00000302516 MCUQ8NE86 351 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 PBXIP1Q96AQ6 731 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 EDC3Q96F86 508 aaKnown RBP8.14□□□□□ -1.11
SF3B3-201ENST00000302516 BTBD6Q96KE9 485 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 PCDHB6Q9Y5E3 794 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 MYH10P35580 1976 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 LMTK3Q96Q04 1460 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 PHKA1P46020 1223 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 TFAMQ00059 246 aaKnown RBP8.14□□□□□ -1.11
SF3B3-201ENST00000302516 KCNB1Q14721 858 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 RASSF3Q86WH2 238 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 GRAMD1CQ8IYS0 662 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 RNF169Q8NCN4 708 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 IL17REQ8NFR9 667 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 RAD54LQ92698 747 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 ANO3Q9BYT9 981 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 GINM1Q9NU53 330 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 THRAP3Q9Y2W1 955 aaKnown RBP8.14□□□□□ -1.11
SF3B3-201ENST00000302516 GOLGA8JA6NMD2 632 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 CFLARO15519 480 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 IL10P22301 178 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 ADORA1P30542 326 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 RAP1GDS1P52306 607 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 BYSLQ13895 437 aaKnown RBP8.14□□□□□ -1.11
SF3B3-201ENST00000302516 MCPH1Q8NEM0 835 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 TNIP2Q8NFZ5 429 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 TBC1D23Q9NUY8 699 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 STX18Q9P2W9 335 aaKnown RBP8.14□□□□□ -1.11
SF3B3-201ENST00000302516 ANAPC7Q9UJX3 599 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 TRPC5Q9UL62 973 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-201ENST00000302516 LRRC53A6NM62 1247 aa8.14□□□□□ -1.11
SF3B3-201ENST00000302516 E2F6O75461 281 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms