RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 BAP1Q92560 729 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 MPHOSPH6Q99547 160 aaKnown RBP24.45■■□□□ 1.51
SMAD1-201ENST00000302085 EDEM3Q9BZQ6 932 aa24.45■■□□□ 1.51
SMAD1-201ENST00000302085 HNRNPH3P31942 346 aaKnown RBP24.45■■□□□ 1.5
SMAD1-201ENST00000302085 ANKRD23Q86SG2 305 aa24.45■■□□□ 1.5
SMAD1-201ENST00000302085 SLC9A9Q8IVB4 645 aa24.45■■□□□ 1.5
SMAD1-201ENST00000302085 FAM186BQ8IYM0 893 aa24.45■■□□□ 1.5
SMAD1-201ENST00000302085 BSNDQ8WZ55 320 aa24.45■■□□□ 1.5
SMAD1-201ENST00000302085 PCYT2Q99447 389 aa24.45■■□□□ 1.5
SMAD1-201ENST00000302085 LSM14BQ9BX40 385 aaKnown RBP24.45■■□□□ 1.5
SMAD1-201ENST00000302085 TMEM206Q9H813 350 aa24.45■■□□□ 1.5
SMAD1-201ENST00000302085 ZNHIT6Q9NWK9 470 aaKnown RBP24.45■■□□□ 1.5
SMAD1-201ENST00000302085 EPN1Q9Y6I3 576 aaPredicted RBP24.45■■□□□ 1.5
SMAD1-201ENST00000302085 DGAT1O75907 488 aa24.44■■□□□ 1.5
SMAD1-201ENST00000302085 ARIH2O95376 493 aa24.44■■□□□ 1.5
SMAD1-201ENST00000302085 AFPP02771 609 aaKnown RBP24.44■■□□□ 1.5
SMAD1-201ENST00000302085 XRCC5P13010 732 aaKnown RBP24.44■■□□□ 1.5
SMAD1-201ENST00000302085 CYP2J2P51589 502 aa24.44■■□□□ 1.5
SMAD1-201ENST00000302085 SPRYD7Q5W111 196 aa24.44■■□□□ 1.5
SMAD1-201ENST00000302085 MORC4Q8TE76 937 aa24.44■■□□□ 1.5
SMAD1-201ENST00000302085 SLC35C1Q96A29 364 aa24.44■■□□□ 1.5
SMAD1-201ENST00000302085 MKNK1Q9BUB5 465 aa24.44■■□□□ 1.5
SMAD1-201ENST00000302085 XPNPEP1Q9NQW7 623 aa24.44■■□□□ 1.5
SMAD1-201ENST00000302085 DDX41Q9UJV9 622 aaKnown RBP24.44■■□□□ 1.5
SMAD1-201ENST00000302085 ZNFX1Q9P2E3 1918 aaKnown RBP24.44■■□□□ 1.5
SMAD1-201ENST00000302085 GGPS1O95749 300 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 NPTX2P47972 431 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 CDK17Q00537 523 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 ANKRD13CQ8N6S4 541 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 KIFAP3Q92845 792 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 PLAGL2Q9UPG8 496 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 UQCRHLA0A096LP55 91 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 NDUFA10O95299 355 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 UQCRHP07919 91 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 APBA1Q02410 837 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 MYBPC2Q14324 1141 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 DPY19L2P1Q6NXN4 242 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 RRAGAQ7L523 313 aa24.43■■□□□ 1.5
SMAD1-201ENST00000302085 NTPCRQ9BSD7 190 aaKnown RBP24.43■■□□□ 1.5
SMAD1-201ENST00000302085 ARID2Q68CP9 1835 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 MYH9P35579 1960 aaKnown RBP24.42■■□□□ 1.5
SMAD1-201ENST00000302085 TISP43B9A030 160 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 MTERF2Q49AM1 385 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 DCAF17Q5H9S7 520 aaPredicted RBP24.42■■□□□ 1.5
SMAD1-201ENST00000302085 METTL7BQ6UX53 244 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 SLC17A8Q8NDX2 589 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 TMEM161BQ8NDZ6 487 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 SPIRE2Q8WWL2 714 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 REXO2Q9Y3B8 237 aaKnown RBP24.42■■□□□ 1.5
SMAD1-201ENST00000302085 CCDC169A6NNP5 214 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 OATP04181 439 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 SMTNP53814 917 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 CCNA1P78396 465 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 CST9Q5W186 159 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 PDXDC1Q6P996 788 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 MCPH1Q8NEM0 835 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 TMEM174Q8WUU8 243 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 NHEJ1Q9H9Q4 299 aaPredicted RBP24.42■■□□□ 1.5
SMAD1-201ENST00000302085 C17orf75Q9HAS0 396 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 ATP6V0A4Q9HBG4 840 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 CEP72Q9P209 647 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 DNAI1Q9UI46 699 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 FRMD4BQ9Y2L6 1034 aa24.42■■□□□ 1.5
SMAD1-201ENST00000302085 LRRC53A6NM62 1247 aa24.41■■□□□ 1.5
SMAD1-201ENST00000302085 FANCGO15287 622 aa24.41■■□□□ 1.5
SMAD1-201ENST00000302085 DMP1Q13316 513 aaPredicted RBP24.41■■□□□ 1.5
SMAD1-201ENST00000302085 TCERG1LQ5VWI1 586 aa24.41■■□□□ 1.5
SMAD1-201ENST00000302085 KCNV1Q6PIU1 500 aa24.41■■□□□ 1.5
SMAD1-201ENST00000302085 PTPN18Q99952 460 aa24.41■■□□□ 1.5
SMAD1-201ENST00000302085 KIFC3Q9BVG8 833 aa24.41■■□□□ 1.5
SMAD1-201ENST00000302085 NIFKQ9BYG3 293 aaKnown RBP24.41■■□□□ 1.5
SMAD1-201ENST00000302085 MLXIPQ9HAP2 919 aa24.41■■□□□ 1.5
SMAD1-201ENST00000302085 NMRK2Q9NPI5 230 aa24.41■■□□□ 1.5
SMAD1-201ENST00000302085 LZTFL1Q9NQ48 299 aa24.41■■□□□ 1.5
SMAD1-201ENST00000302085 MORF4L1Q9UBU8 362 aa24.41■■□□□ 1.5
SMAD1-201ENST00000302085 CACNA2D4Q7Z3S7 1137 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 FBXO16Q8IX29 292 aaPredicted RBP24.4■■□□□ 1.5
SMAD1-201ENST00000302085 C12orf56Q8IXR9 622 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 SEPT1Q8WYJ6 367 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 CEP89Q96ST8 783 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 GANQ9H2C0 597 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 NLRC4Q9NPP4 1024 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 KMT5AQ9NQR1 393 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 CGNQ9P2M7 1197 aaKnown RBP24.4■■□□□ 1.5
SMAD1-201ENST00000302085 TBX20Q9UMR3 447 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 EXOC3O60645 756 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 ZBTB48P10074 688 aaPredicted RBP24.4■■□□□ 1.5
SMAD1-201ENST00000302085 SLC9A1P19634 815 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 GCLCP48506 637 aaPredicted RBP24.4■■□□□ 1.5
SMAD1-201ENST00000302085 RTP1P59025 263 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 CELF3Q5SZQ8 465 aaKnown RBP24.4■■□□□ 1.5
SMAD1-201ENST00000302085 CCDC62Q6P9F0 684 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 PCIF1Q9H4Z3 704 aa24.4■■□□□ 1.5
SMAD1-201ENST00000302085 LOC102724159A0A0B4J2E5 919 aa24.39■■□□□ 1.49
SMAD1-201ENST00000302085 STAT5BP51692 787 aa24.39■■□□□ 1.49
SMAD1-201ENST00000302085 POLR2FP61218 127 aaKnown RBP24.39■■□□□ 1.49
SMAD1-201ENST00000302085 PWP2Q15269 919 aaKnown RBP24.39■■□□□ 1.49
SMAD1-201ENST00000302085 ZNF792Q3KQV3 632 aa24.39■■□□□ 1.49
SMAD1-201ENST00000302085 CCDC170Q8IYT3 715 aa24.39■■□□□ 1.49
SMAD1-201ENST00000302085 AFAP1L1Q8TED9 768 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms