RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 BZW2Q9Y6E2 419 aaKnown RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 MAP3K13O43283 966 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 RPL21P46778 160 aaKnown RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 GALCP54803 685 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 MAPK7Q13164 816 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 TMEM266Q2M3C6 531 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 C6orf118Q5T5N4 469 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 EXOC3L1Q86VI1 746 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 LNX1Q8TBB1 728 aaPredicted RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 C18orf8Q96DM3 657 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 OSBPL1AQ9BXW6 950 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 MLXIPLQ9NP71 852 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 JAG2Q9Y219 1238 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 CCNG1P51959 295 aa11.77□□□□□ -0.52
ZNF558-201ENST00000301475 C12orf60Q5U649 245 aa11.77□□□□□ -0.52
ZNF558-201ENST00000301475 BARGINQ6ZT62 677 aa11.77□□□□□ -0.52
ZNF558-201ENST00000301475 OTUD6AQ7L8S5 288 aa11.77□□□□□ -0.52
ZNF558-201ENST00000301475 ALG3Q92685 438 aa11.77□□□□□ -0.52
ZNF558-201ENST00000301475 UTP4Q969X6 686 aaKnown RBP11.77□□□□□ -0.52
ZNF558-201ENST00000301475 VAT1LQ9HCJ6 419 aa11.77□□□□□ -0.52
ZNF558-201ENST00000301475 SIX2Q9NPC8 291 aa11.77□□□□□ -0.52
ZNF558-201ENST00000301475 ZFATQ9P243 1243 aa11.77□□□□□ -0.52
ZNF558-201ENST00000301475 TSPY3P0CV98 308 aa11.77□□□□□ -0.53
ZNF558-201ENST00000301475 TSPY8P0CW00 308 aa11.77□□□□□ -0.53
ZNF558-201ENST00000301475 NR2F2P24468 414 aa11.77□□□□□ -0.53
ZNF558-201ENST00000301475 IL6STP40189 918 aaPredicted RBP11.77□□□□□ -0.53
ZNF558-201ENST00000301475 JAM2P57087 298 aa11.77□□□□□ -0.53
ZNF558-201ENST00000301475 MGAT5Q09328 741 aa11.77□□□□□ -0.53
ZNF558-201ENST00000301475 TAF11Q15544 211 aa11.77□□□□□ -0.53
ZNF558-201ENST00000301475 EXOC3L4Q17RC7 722 aa11.77□□□□□ -0.53
ZNF558-201ENST00000301475 USP17L2Q6R6M4 530 aa11.77□□□□□ -0.53
ZNF558-201ENST00000301475 PIGSQ96S52 555 aa11.77□□□□□ -0.53
ZNF558-201ENST00000301475 NKX1-2Q9UD57 310 aaPredicted RBP11.77□□□□□ -0.53
ZNF558-201ENST00000301475 ATP8B3O60423 1300 aa11.77□□□□□ -0.53
ZNF558-201ENST00000301475 FOXO6A8MYZ6 492 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 E9PMD0 336 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 RIPK2O43353 540 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 SUN1O94901 812 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 GJB6O95452 261 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 MYBL1P10243 752 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 PTGIRP43119 386 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 CASP5P51878 434 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 NPEPPSP55786 919 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 ORC2Q13416 577 aaPredicted RBP11.76□□□□□ -0.53
ZNF558-201ENST00000301475 SEPT2Q15019 361 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 CAVIN4Q5BKX8 364 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 NUGGCQ68CJ6 796 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 SMIM5Q71RC9 77 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 SLC35G2Q8TBE7 412 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 NAF1Q96HR8 494 aaKnown RBP11.76□□□□□ -0.53
ZNF558-201ENST00000301475 CRAMP1Q96RY5 1269 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 CARD9Q9H257 536 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 ETAA1Q9NY74 926 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 TMOD4Q9NZQ9 345 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 CNOT7Q9UIV1 285 aaKnown RBP11.76□□□□□ -0.53
ZNF558-201ENST00000301475 ZMYND8Q9ULU4 1186 aaPredicted RBP11.76□□□□□ -0.53
ZNF558-201ENST00000301475 FAM187AA6NFU0 413 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 RASGRF2O14827 1237 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 NTSR2O95665 410 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 KRT13P13646 458 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 TUBP50607 506 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 LACTBP83111 547 aaPredicted RBP11.76□□□□□ -0.53
ZNF558-201ENST00000301475 PPATQ06203 517 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 UBE4AQ14139 1066 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 SOGA3Q5TF21 947 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 CGB2Q6NT52 195 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 VSTM1Q6UX27 236 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 DYDC1Q8WWB3 177 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 TMEM109Q9BVC6 243 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 LAMB2P55268 1798 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 NCANO14594 1321 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 PFASO15067 1338 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 TMEM120BA0PK00 339 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 DPPA5A6NC42 116 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 ANKRD63C9JTQ0 380 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 CETN3O15182 167 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 SNUPNO95149 360 aaKnown RBP11.76□□□□□ -0.53
ZNF558-201ENST00000301475 GH1P01241 217 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 AFPP02771 609 aaKnown RBP11.76□□□□□ -0.53
ZNF558-201ENST00000301475 ABCB4P21439 1286 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 HOXA7P31268 230 aaPredicted RBP11.76□□□□□ -0.53
ZNF558-201ENST00000301475 DHX34Q14147 1143 aaKnown RBP11.76□□□□□ -0.53
ZNF558-201ENST00000301475 PDIA5Q14554 519 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 EPHA7Q15375 998 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 HERC4Q5GLZ8 1057 aaPredicted RBP11.76□□□□□ -0.53
ZNF558-201ENST00000301475 TRIM68Q6AZZ1 485 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 TTC27Q6P3X3 843 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 PTF1AQ7RTS3 328 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 SPATA21Q7Z572 469 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 ZDHHC14Q8IZN3 488 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 GBP7Q8N8V2 638 aaPredicted RBP11.76□□□□□ -0.53
ZNF558-201ENST00000301475 RFFLQ8WZ73 363 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 ARHGEF26Q96DR7 871 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 UIMC1Q96RL1 719 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 LRRC27Q9C0I9 530 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 MKNK2Q9HBH9 465 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 PCDHA3Q9Y5H8 950 aa11.76□□□□□ -0.53
ZNF558-201ENST00000301475 GOLGA6L10A0A0M3HER8 536 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms