RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PTPROQ16827 1216 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 PLA2G4FQ68DD2 849 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 DPY19L2P1Q6NXN4 242 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 COG1Q8WTW3 980 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 PPM1EQ8WY54 764 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 SPAG5Q96R06 1193 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.96■■□□□ 1.432e-6■■■■■ 205.4
TPM4-201ENST00000300933 FZD9O00144 591 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 ZBED4O75132 1171 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 SERPING1P05155 500 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 PTPRAP18433 802 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 ARHGEF16Q5VV41 709 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 PAPD7Q5XG87 772 aaKnown RBP23.95■■□□□ 1.42
TPM4-201ENST00000300933 GSPT2Q8IYD1 628 aaKnown RBP23.95■■□□□ 1.42
TPM4-201ENST00000300933 FAM186BQ8IYM0 893 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 SYCP3Q8IZU3 236 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 ZSWIM2Q8NEG5 633 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 RBM46Q8TBY0 533 aaKnown RBP23.95■■□□□ 1.42
TPM4-201ENST00000300933 GCNT4Q9P109 453 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 UBIAD1Q9Y5Z9 338 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 PCNX4Q63HM2 1172 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 NFRKBQ6P4R8 1299 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 CAGE1Q8TC20 777 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 RNF146Q9NTX7 359 aa23.95■■□□□ 1.42
TPM4-201ENST00000300933 PTK2Q05397 1052 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 KLHDC7AQ5VTJ3 777 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 RABEP2Q9H5N1 569 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 PICK1Q9NRD5 415 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 K7ENM7 598 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 PPFIA4O75335 1185 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 LCA5LO95447 670 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 ASIC2Q16515 512 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 SNRNP48Q6IEG0 339 aaKnown RBP23.94■■□□□ 1.42
TPM4-201ENST00000300933 ZNF662Q6ZS27 426 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 ZNF280CQ8ND82 737 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 EHBP1Q8NDI1 1231 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 PDCD2LQ9BRP1 358 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 AGPAT3Q9NRZ7 376 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 GGA3Q9NZ52 723 aa23.94■■□□□ 1.42
TPM4-201ENST00000300933 CCNE2O96020 404 aa23.93■■□□□ 1.42
TPM4-201ENST00000300933 P4HBP07237 508 aaKnown RBP23.93■■□□□ 1.42
TPM4-201ENST00000300933 SOX10P56693 466 aa23.93■■□□□ 1.42
TPM4-201ENST00000300933 WDR93Q6P2C0 686 aa23.93■■□□□ 1.42
TPM4-201ENST00000300933 SCYL3Q8IZE3 742 aa23.93■■□□□ 1.42
TPM4-201ENST00000300933 RBBP6Q7Z6E9 1792 aaKnown RBP23.93■■□□□ 1.42
TPM4-201ENST00000300933 LRRN2O75325 713 aa23.93■■□□□ 1.42
TPM4-201ENST00000300933 TACC1O75410 805 aa23.93■■□□□ 1.42
TPM4-201ENST00000300933 MATR3P43243 847 aaKnown RBP eCLIP23.93■■□□□ 1.42
TPM4-201ENST00000300933 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.93■■□□□ 1.42
TPM4-201ENST00000300933 EDEM3Q9BZQ6 932 aa23.93■■□□□ 1.42
TPM4-201ENST00000300933 PXMP2Q9NR77 195 aa23.93■■□□□ 1.42
TPM4-201ENST00000300933 MYH11P35749 1972 aa23.93■■□□□ 1.42
TPM4-201ENST00000300933 RARRES1P49788 294 aa23.92■■□□□ 1.42
TPM4-201ENST00000300933 ZNF571Q7Z3V5 609 aaPredicted RBP23.92■■□□□ 1.42
TPM4-201ENST00000300933 TSGA10Q9BZW7 698 aa23.92■■□□□ 1.42
TPM4-201ENST00000300933 HPCAL4Q9UM19 191 aa23.92■■□□□ 1.42
TPM4-201ENST00000300933 PACSIN2Q9UNF0 486 aaPredicted RBP23.92■■□□□ 1.42
TPM4-201ENST00000300933 KLRC1P26715 233 aa23.92■■□□□ 1.42
TPM4-201ENST00000300933 ZNF131P52739 623 aa23.92■■□□□ 1.42
TPM4-201ENST00000300933 HIRAP54198 1017 aaPredicted RBP23.92■■□□□ 1.42
TPM4-201ENST00000300933 C2orf54Q08AI8 447 aa23.92■■□□□ 1.42
TPM4-201ENST00000300933 CBWD6Q4V339 395 aa23.92■■□□□ 1.42
TPM4-201ENST00000300933 CBWD3Q5JTY5 395 aa23.92■■□□□ 1.42
TPM4-201ENST00000300933 CBWD5Q5RIA9 395 aa23.92■■□□□ 1.42
TPM4-201ENST00000300933 MICALL1Q8N3F8 863 aa23.92■■□□□ 1.42
TPM4-201ENST00000300933 BORCS6Q96GS4 357 aa23.92■■□□□ 1.42
TPM4-201ENST00000300933 SSU72P8A0A1W2PR75 194 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 BACH1O14867 736 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 PSMC2P35998 433 aaKnown RBP23.91■■□□□ 1.42
TPM4-201ENST00000300933 QARSP47897 775 aaKnown RBP23.91■■□□□ 1.42
TPM4-201ENST00000300933 IRF2BP2Q7Z5L9 587 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 KIFC3Q9BVG8 833 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 GOLPH3Q9H4A6 298 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 SIX2Q9NPC8 291 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 BCRP11274 1271 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 YWHABP31946 246 aaKnown RBP23.91■■□□□ 1.42
TPM4-201ENST00000300933 GGCXP38435 758 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 USP14P54578 494 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 KIAA0753Q2KHM9 967 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 DNAJC21Q5F1R6 531 aaKnown RBP23.91■■□□□ 1.42
TPM4-201ENST00000300933 GBP6Q6ZN66 633 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 HS2ST1Q7LGA3 356 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 TRIM58Q8NG06 486 aa23.91■■□□□ 1.42
TPM4-201ENST00000300933 CCDC43Q96MW1 224 aaKnown RBP23.91■■□□□ 1.42
TPM4-201ENST00000300933 EIF3DO15371 548 aaKnown RBP eCLIP23.9■■□□□ 1.42
TPM4-201ENST00000300933 TCEAL9Q9UHQ7 104 aa23.9■■□□□ 1.42
TPM4-201ENST00000300933 EXOC3O60645 756 aa23.9■■□□□ 1.42
TPM4-201ENST00000300933 FTCDO95954 541 aa23.9■■□□□ 1.42
TPM4-201ENST00000300933 TUBBP07437 444 aa23.9■■□□□ 1.42
TPM4-201ENST00000300933 DLG4P78352 724 aa23.9■■□□□ 1.42
TPM4-201ENST00000300933 AIPL1Q9NZN9 384 aa23.9■■□□□ 1.42
TPM4-201ENST00000300933 TMEM132BQ14DG7 1078 aa23.89■■□□□ 1.42
TPM4-201ENST00000300933 SLC18A3Q16572 532 aa23.89■■□□□ 1.42
TPM4-201ENST00000300933 DCAF15Q66K64 600 aa23.89■■□□□ 1.42
TPM4-201ENST00000300933 CBWD1Q9BRT8 395 aa23.89■■□□□ 1.42
TPM4-201ENST00000300933 METTL14Q9HCE5 456 aaKnown RBP23.89■■□□□ 1.42
TPM4-201ENST00000300933 ODF2LQ9ULJ1 636 aa23.89■■□□□ 1.42
TPM4-201ENST00000300933 SLC16A4O15374 487 aa23.89■■□□□ 1.41
TPM4-201ENST00000300933 GFPT2O94808 682 aa23.89■■□□□ 1.41
TPM4-201ENST00000300933 GUCY2CP25092 1073 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms