RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 ATP11BQ9Y2G3 1177 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 KPNB1Q14974 876 aaKnown RBP12.03□□□□□ -0.48
GCN1-201ENST00000300648 NAA35Q5VZE5 725 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 TOGARAM2Q6ZUX3 1019 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 PDP2Q9P2J9 529 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 ZNF229Q9UJW7 825 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 ARL2BPQ9Y2Y0 163 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 KRT87PA6NCN2 255 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 PRPF3O43395 683 aaKnown RBP12.03□□□□□ -0.48
GCN1-201ENST00000300648 HSPA9P38646 679 aaKnown RBP12.03□□□□□ -0.48
GCN1-201ENST00000300648 CCDC134Q9H6E4 229 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 ERVV-1B6SEH8 477 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 BBOX1O75936 387 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 MAP4P27816 1152 aaKnown RBP12.03□□□□□ -0.48
GCN1-201ENST00000300648 CARSP49589 748 aaKnown RBP12.03□□□□□ -0.48
GCN1-201ENST00000300648 BLVRAP53004 296 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 DCLK2Q8N568 766 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 SNX19Q92543 992 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 ELAC2Q9BQ52 826 aaKnown RBP12.03□□□□□ -0.48
GCN1-201ENST00000300648 FAM95CA0A1B0GW59 222 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 STAT4Q14765 748 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 CPXCR1Q8N123 301 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 RIBC1Q8N443 379 aaPredicted RBP12.03□□□□□ -0.48
GCN1-201ENST00000300648 STAMQ92783 540 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 ASNSD1Q9NWL6 643 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.03□□□□□ -0.48
GCN1-201ENST00000300648 ZHX2Q9Y6X8 837 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 SPAG6O75602 509 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 JAK3P52333 1124 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 BYSLQ13895 437 aaKnown RBP12.03□□□□□ -0.48
GCN1-201ENST00000300648 CEP95Q96GE4 821 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 SEL1LQ9UBV2 794 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 GFPT2O94808 682 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 ZRANB2O95218 330 aaKnown RBP eCLIP12.03□□□□□ -0.486e-7■■■■□ 25.1
GCN1-201ENST00000300648 C16orf89Q6UX73 402 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 MAPKAPK5Q8IW41 473 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 FSD1LQ9BXM9 530 aa12.03□□□□□ -0.48
GCN1-201ENST00000300648 GSPT1P15170 499 aaKnown RBP12.02□□□□□ -0.48
GCN1-201ENST00000300648 GGCXP38435 758 aa12.02□□□□□ -0.48
GCN1-201ENST00000300648 SKOR1P84550 965 aa12.02□□□□□ -0.48
GCN1-201ENST00000300648 CFAP36Q96G28 342 aa12.02□□□□□ -0.48
GCN1-201ENST00000300648 ZNF577Q9BSK1 485 aa12.02□□□□□ -0.48
GCN1-201ENST00000300648 EPS8L2Q9H6S3 715 aa12.02□□□□□ -0.48
GCN1-201ENST00000300648 ETNK1Q9HBU6 452 aa12.02□□□□□ -0.48
GCN1-201ENST00000300648 PSD3Q9NYI0 1048 aa12.02□□□□□ -0.48
GCN1-201ENST00000300648 INTUQ9ULD6 942 aa12.02□□□□□ -0.48
GCN1-201ENST00000300648 MOCS3O95396 460 aa12.02□□□□□ -0.48
GCN1-201ENST00000300648 TMED10P49755 219 aaKnown RBP12.02□□□□□ -0.48
GCN1-201ENST00000300648 SF3A3Q12874 501 aaKnown RBP eCLIP12.02□□□□□ -0.481e-6■■■■□ 24.2
GCN1-201ENST00000300648 KHDRBS2Q5VWX1 349 aaKnown RBP12.02□□□□□ -0.48
GCN1-201ENST00000300648 MRPS26Q9BYN8 205 aaKnown RBP12.02□□□□□ -0.48
GCN1-201ENST00000300648 AGTP01019 485 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 CCND2P30279 289 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 ARFIP2P53365 341 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 KYAT1Q16773 422 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 ZC3H12BQ5HYM0 836 aaKnown RBP12.02□□□□□ -0.49
GCN1-201ENST00000300648 COG1Q8WTW3 980 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 TADA1Q96BN2 335 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 THAP11Q96EK4 314 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 C19orf60Q96EN9 201 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 CYTH2Q99418 400 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 PLEKHA4Q9H4M7 779 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 THRAP3Q9Y2W1 955 aaKnown RBP12.02□□□□□ -0.49
GCN1-201ENST00000300648 TARBP1Q13395 1621 aaKnown RBP12.02□□□□□ -0.49
GCN1-201ENST00000300648 USP17L12C9JPN9 530 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 USP17L21D6R901 530 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 PRR23D1E9PI22 279 aaPredicted RBP12.02□□□□□ -0.49
GCN1-201ENST00000300648 ADCY3O60266 1144 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 PRR23D2P0DMB1 279 aaPredicted RBP12.02□□□□□ -0.49
GCN1-201ENST00000300648 C4orf50Q6ZRC1 276 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 PIK3R5Q8WYR1 880 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 PSMA2P25787 234 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 SERPINB1P30740 379 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 COPB2P35606 906 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 BAG6P46379 1132 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 PMS2P54278 862 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 GUCY1A3Q02108 690 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 RUNX1T1Q06455 604 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 CPSF1Q10570 1443 aaKnown RBP12.02□□□□□ -0.49
GCN1-201ENST00000300648 AP3B2Q13367 1082 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 ZNF827Q17R98 1081 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 CNBD2Q96M20 576 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 KCNK16Q96T55 309 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 RIMBP2O15034 1052 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 MEFVO15553 781 aaPredicted RBP12.02□□□□□ -0.49
GCN1-201ENST00000300648 SPOUT1Q5T280 376 aaKnown RBP12.02□□□□□ -0.49
GCN1-201ENST00000300648 SGSM3Q96HU1 749 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 ECT2Q9H8V3 914 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 AP4S1Q9Y587 144 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 A0A1W2PQC6 194 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 TBC1D4O60343 1298 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 MRPS25P82663 173 aaKnown RBP12.02□□□□□ -0.49
GCN1-201ENST00000300648 PTK2BQ14289 1009 aa12.02□□□□□ -0.49
GCN1-201ENST00000300648 DDX42Q86XP3 938 aaKnown RBP eCLIP12.02□□□□□ -0.49
GCN1-201ENST00000300648 UBE2TQ9NPD8 197 aaPredicted RBP12.02□□□□□ -0.49
GCN1-201ENST00000300648 CHD1O14646 1710 aa12.01□□□□□ -0.49
GCN1-201ENST00000300648 TRPM1Q7Z4N2 1603 aa12.01□□□□□ -0.49
GCN1-201ENST00000300648 MAP3K13O43283 966 aa12.01□□□□□ -0.49
GCN1-201ENST00000300648 RASSF9O75901 435 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms