RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 CFAP221Q4G0U5 840 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 EFCAB12Q6NXP0 572 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 DDX50Q9BQ39 737 aaKnown RBP7.66□□□□□ -1.18
RAG1-201ENST00000299440 XPNPEP3Q9NQH7 507 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 DONSONQ9NYP3 566 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 ERAP1Q9NZ08 941 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 SHROOM2Q13796 1616 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 TTLL13PA6NNM8 815 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 CPP00450 1065 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 IFNAR1P17181 557 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 KCNB1Q14721 858 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 TOGARAM2Q6ZUX3 1019 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 USP50Q70EL3 339 aaPredicted RBP7.66□□□□□ -1.18
RAG1-201ENST00000299440 TADA2BQ86TJ2 420 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 POTEDQ86YR6 584 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 RASEFQ8IZ41 740 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 ZNF513Q8N8E2 541 aaPredicted RBP7.66□□□□□ -1.18
RAG1-201ENST00000299440 P2RX5Q93086 422 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 FAM81BQ96LP2 452 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 RMDN2Q96LZ7 410 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 TUBGCP2Q9BSJ2 902 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 DPH5Q9H2P9 285 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 POLLQ9UGP5 575 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 PRR12Q9ULL5 1215 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 SNX9Q9Y5X1 595 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 RPAP1Q9BWH6 1393 aaPredicted RBP7.66□□□□□ -1.18
RAG1-201ENST00000299440 YWHABP31946 246 aaKnown RBP7.66□□□□□ -1.18
RAG1-201ENST00000299440 LAMC2Q13753 1193 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 ANKRD42Q8N9B4 389 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 STKLD1Q8NE28 680 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 APPL2Q8NEU8 664 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 PKNOX2Q96KN3 472 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 CBX8Q9HC52 389 aa7.66□□□□□ -1.18
RAG1-201ENST00000299440 RBAKQ9NYW8 714 aaPredicted RBP7.66□□□□□ -1.18
RAG1-201ENST00000299440 TMEM88BA6NKF7 163 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 ADCY3O60266 1144 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 PDGFRBP09619 1106 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 CDC42EP1Q00587 391 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 BTG3Q14201 252 aaPredicted RBP7.65□□□□□ -1.18
RAG1-201ENST00000299440 GKAP1Q5VSY0 366 aaPredicted RBP7.65□□□□□ -1.18
RAG1-201ENST00000299440 RPUSD2Q8IZ73 545 aaKnown RBP7.65□□□□□ -1.18
RAG1-201ENST00000299440 FAM133AQ8N9E0 248 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 NEDD1Q8NHV4 660 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 MRPL47Q9HD33 250 aaKnown RBP7.65□□□□□ -1.18
RAG1-201ENST00000299440 SRGNP10124 158 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 KPNA1P52294 538 aaPredicted RBP7.65□□□□□ -1.18
RAG1-201ENST00000299440 ZNF131P52739 623 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 SP3Q02447 781 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 NOGQ13253 232 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 ANGPTL8Q6UXH0 198 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 COLEC11Q9BWP8 271 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 KLK14Q9P0G3 267 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 RAB23Q9ULC3 237 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 AGAP1Q9UPQ3 857 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 CLASP1Q7Z460 1538 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 CMA1P23946 247 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 FKBP3Q00688 224 aaKnown RBP7.65□□□□□ -1.18
RAG1-201ENST00000299440 GRM4Q14833 912 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 TMEM132BQ14DG7 1078 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 STAG2Q8N3U4 1231 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 OR8K1Q8NGG5 319 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 L3MBTL3Q96JM7 780 aaPredicted RBP7.65□□□□□ -1.18
RAG1-201ENST00000299440 NUDCD1Q96RS6 583 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 GAS2L1Q99501 681 aaPredicted RBP7.65□□□□□ -1.18
RAG1-201ENST00000299440 EDEM3Q9BZQ6 932 aa7.65□□□□□ -1.18
RAG1-201ENST00000299440 KLHL8Q9P2G9 620 aaPredicted RBP7.65□□□□□ -1.18
RAG1-201ENST00000299440 CIB2O75838 187 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 NLRP11P59045 1033 aaKnown RBP7.65□□□□□ -1.19
RAG1-201ENST00000299440 FOXO4P98177 505 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 NR1H3Q13133 447 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 CEP55Q53EZ4 464 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 POTEAQ6S8J7 498 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 FRA10AC1Q70Z53 315 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 IFT20Q8IY31 132 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 P3H4Q92791 437 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 FAM20AQ96MK3 541 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 MUC3BQ9H195 1237 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 FBXO28Q9NVF7 368 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 STAP1Q9ULZ2 295 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 SPATA31E1Q6ZUB1 1445 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 TBKBP1A7MCY6 615 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 MAGEB2O15479 319 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 DDHD2O94830 711 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 TDP2O95551 362 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 KLRK1P26718 216 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 WEE1P30291 646 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 MAP7Q14244 749 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 C12orf60Q5U649 245 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 RGMBQ6NW40 437 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 CYB5R4Q7L1T6 521 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 MTMR4Q9NYA4 1195 aa7.65□□□□□ -1.19
RAG1-201ENST00000299440 ABI2Q9NYB9 513 aaPredicted RBP7.65□□□□□ -1.19
RAG1-201ENST00000299440 UBE4BO95155 1302 aa7.64□□□□□ -1.19
RAG1-201ENST00000299440 DFFAO00273 331 aa7.64□□□□□ -1.19
RAG1-201ENST00000299440 PPFIA4O75335 1185 aa7.64□□□□□ -1.19
RAG1-201ENST00000299440 NPTXRO95502 500 aa7.64□□□□□ -1.19
RAG1-201ENST00000299440 ZBED1O96006 694 aa7.64□□□□□ -1.19
RAG1-201ENST00000299440 SNX17Q15036 470 aa7.64□□□□□ -1.19
RAG1-201ENST00000299440 TAS2R42Q7RTR8 314 aa7.64□□□□□ -1.19
RAG1-201ENST00000299440 XXYLT1Q8NBI6 393 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms