RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 CALN1Q9BXU9 219 aa17.65■□□□□ 0.42
SNAPC4-201ENST00000298532 EEF1B2P24534 225 aaKnown RBP17.64■□□□□ 0.42
SNAPC4-201ENST00000298532 ALCAMQ13740 583 aa17.64■□□□□ 0.42
SNAPC4-201ENST00000298532 FAM96AQ9H5X1 160 aa17.64■□□□□ 0.42
SNAPC4-201ENST00000298532 FER1L4A9Z1Z3 1794 aa17.64■□□□□ 0.42
SNAPC4-201ENST00000298532 EEF1DP29692 281 aaKnown RBP17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 CA8P35219 290 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 GPC5P78333 572 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 CYB5R4Q7L1T6 521 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 OXER1Q8TDS5 423 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 TRIM56Q9BRZ2 755 aaKnown RBP17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 MLXIPLQ9NP71 852 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 IPO11Q9UI26 975 aaKnown RBP17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 NOC2LQ9Y3T9 749 aaKnown RBP17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 USP17L8P0C7I0 530 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 AP2B1P63010 937 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 BIRC2Q13490 618 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 HIPK4Q8NE63 616 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 FGD4Q96M96 766 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 SEC31BQ9NQW1 1179 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 ITIH6Q6UXX5 1313 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 REREQ9P2R6 1566 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 PFDN6O15212 129 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 C21orf2O43822 256 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 TJP3O95049 919 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 PFKFB3Q16875 520 aaPredicted RBP17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 LRIG3Q6UXM1 1119 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 C2orf69Q8N8R5 385 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 KMT5AQ9NQR1 393 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 MYO3AQ8NEV4 1616 aa17.64■□□□□ 0.41
SNAPC4-201ENST00000298532 IRAK1P51617 712 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 TTLL11Q8NHH1 800 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 ATP6V0A1Q93050 837 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 L2HGDHQ9H9P8 463 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 ORC6Q9Y5N6 252 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 CPDO75976 1380 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 CD163L1Q9NR16 1453 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 UBN2Q6ZU65 1347 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 KIF28PB7ZC32 967 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 KCNH2Q12809 1159 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 USP17L2Q6R6M4 530 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 RAB44Q7Z6P3 723 aaPredicted RBP17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 SH2D3CQ8N5H7 860 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 KCTD6Q8NC69 237 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 STAMBPL1Q96FJ0 436 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 APOBEC2Q9Y235 224 aaKnown RBP17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 FOXP4Q8IVH2 680 aaPredicted RBP17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 STAG2Q8N3U4 1231 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 CFAP36Q96G28 342 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 ADPGKQ9BRR6 497 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 NDE1Q9NXR1 346 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 ZRANB2O95218 330 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 RASGRF1Q13972 1273 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 DHX34Q14147 1143 aaKnown RBP17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 LY9Q9HBG7 655 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 NEDD4P46934 1319 aa17.63■□□□□ 0.41
SNAPC4-201ENST00000298532 CYP2D7A0A087X1C5 515 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 GNGT2O14610 69 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 RAD17O75943 681 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 TRIM28Q13263 835 aaKnown RBP17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 KLHL38Q2WGJ6 581 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 MCUQ8NE86 351 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 SRGAP2BP0DMP2 458 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 CDC27P30260 824 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 ABCD1P33897 745 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 MCAMP43121 646 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 ARFIP2P53365 341 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 HACE1Q8IYU2 909 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 GUF1Q8N442 669 aaKnown RBP17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 TC2NQ8N9U0 490 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 ARL2BPQ9Y2Y0 163 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 RBM41Q96IZ5 413 aaKnown RBP17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 ZMAT2Q96NC0 199 aaKnown RBP17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 TUBE1Q9UJT0 475 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 LRRC14Q15048 493 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 FSCBQ5H9T9 825 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 DEPDC1BQ8WUY9 529 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 PAGR1Q9BTK6 254 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 KANSL2Q9H9L4 492 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 NRBP2Q9NSY0 501 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 CNOT8Q9UFF9 292 aaKnown RBP17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 ANAPC7Q9UJX3 599 aa17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 G3BP2Q9UN86 482 aaKnown RBP17.62■□□□□ 0.41
SNAPC4-201ENST00000298532 ARHGAP10A1A4S6 786 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 KRT38O76015 456 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 PDXDC1Q6P996 788 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 SPATA21Q7Z572 469 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 SP8Q8IXZ3 490 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 DNAAF3Q8N9W5 541 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 BHMT2Q9H2M3 363 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 PNMA3Q9UL41 463 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 LSP1P33241 339 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 HSPA9P38646 679 aaKnown RBP17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 KCTD1Q719H9 257 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 DCLK2Q8N568 766 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 METTL13Q8N6R0 699 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 IL17RAQ96F46 866 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 MED10Q9BTT4 135 aa17.61■□□□□ 0.41
SNAPC4-201ENST00000298532 PI4KBQ9UBF8 816 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms