RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 N4BP3O15049 544 aa20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 LGALS2P05162 132 aa20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 ZNF865P0CJ78 1059 aaPredicted RBP20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 SMTNP53814 917 aa20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 NCKAP1LP55160 1127 aa20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 RTP1P59025 263 aa20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 FILIP1Q7Z7B0 1213 aa20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 KSR1Q8IVT5 923 aa20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 VSTM4Q8IW00 320 aa20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 CEP63Q96MT8 703 aa20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 POLR3FQ9H1D9 316 aaPredicted RBP20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 RTN4Q9NQC3 1192 aaKnown RBP20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 ERAP1Q9NZ08 941 aa20.39■□□□□ 0.85
SEC61A2-201ENST00000298428 IGHA2P01877 340 aa20.38■□□□□ 0.85
SEC61A2-201ENST00000298428 MTIF2P46199 727 aaKnown RBP20.38■□□□□ 0.85
SEC61A2-201ENST00000298428 NPTX2P47972 431 aa20.38■□□□□ 0.85
SEC61A2-201ENST00000298428 CCDC186Q7Z3E2 898 aa20.38■□□□□ 0.85
SEC61A2-201ENST00000298428 HAUS6Q7Z4H7 955 aa20.38■□□□□ 0.85
SEC61A2-201ENST00000298428 ZC3H3Q8IXZ2 948 aaKnown RBP20.38■□□□□ 0.85
SEC61A2-201ENST00000298428 BSNDQ8WZ55 320 aa20.38■□□□□ 0.85
SEC61A2-201ENST00000298428 TUBGCP2Q9BSJ2 902 aa20.38■□□□□ 0.85
SEC61A2-201ENST00000298428 ST6GALNAC4Q9H4F1 302 aa20.38■□□□□ 0.85
SEC61A2-201ENST00000298428 TRPC6Q9Y210 931 aa20.38■□□□□ 0.85
SEC61A2-201ENST00000298428 CCDC169A6NNP5 214 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 SLC16A4O15374 487 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 TEX33O43247 280 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 PPFIA4O75335 1185 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 XRCC5P13010 732 aaKnown RBP20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 NR2F2P24468 414 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 MAP2K2P36507 400 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 SP3Q02447 781 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 ADAM9Q13443 819 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 PTPN21Q16825 1174 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 SPIRE2Q8WWL2 714 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 CFHR5Q9BXR6 569 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 IMPACTQ9P2X3 320 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 TGFB1I1O43294 461 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 TRPA1O75762 1119 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 TPM2P07951 284 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 MMP3P08254 477 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 PRKCSHP14314 528 aaPredicted RBP20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 VEGFBP49765 207 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 TBC1D8BQ0IIM8 1120 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 KIF22Q14807 665 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 TMEM143Q96AN5 459 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 IFT74Q96LB3 600 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 KMT5AQ9NQR1 393 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 GABRQQ9UN88 632 aa20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 GNEQ9Y223 722 aaKnown RBP20.37■□□□□ 0.85
SEC61A2-201ENST00000298428 CETN3O15182 167 aa20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 HBP1O60381 514 aa20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 MAFO75444 373 aaPredicted RBP20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 ZNF286BP0CG31 522 aa20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 FLT3LGP49771 235 aa20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 GTF2BQ00403 316 aa20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 HS2ST1Q7LGA3 356 aa20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 SYCP3Q8IZU3 236 aa20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 KIFC3Q9BVG8 833 aa20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 GBP3Q9H0R5 595 aa20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 TMEM206Q9H813 350 aa20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 RNF186Q9NXI6 227 aa20.36■□□□□ 0.85
SEC61A2-201ENST00000298428 ZBTB42B2RXF5 422 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 DYNC1LI2O43237 492 aaPredicted RBP20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 GNA14O95837 355 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 NR3C1P04150 777 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 HOXD8P13378 290 aaPredicted RBP20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 RPL13P26373 211 aaKnown RBP20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 PRKCZQ05513 592 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 TMEM161BQ8NDZ6 487 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 ACCSQ96QU6 501 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 NTPCRQ9BSD7 190 aaKnown RBP20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 IKZF4Q9H2S9 585 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 ZNF215Q9UL58 517 aaPredicted RBP20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 LGALS16A8MUM7 142 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 PES1O00541 588 aaKnown RBP20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 CLIC2O15247 247 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 HTRA3P83110 453 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 DGKDQ16760 1214 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 CCDC40Q4G0X9 1142 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 SPECC1LQ69YQ0 1117 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 TLK2Q86UE8 772 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 EXOC8Q8IYI6 725 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 GOLGA5Q8TBA6 731 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 C16orf70Q9BSU1 422 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 NOC4LQ9BVI4 516 aaKnown RBP20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 RNPEPQ9H4A4 650 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 KCNG1Q9UIX4 513 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 FAM184BQ9ULE4 1060 aa20.35■□□□□ 0.85
SEC61A2-201ENST00000298428 ARL2P36404 184 aa20.34■□□□□ 0.85
SEC61A2-201ENST00000298428 UBXN1Q04323 297 aa20.34■□□□□ 0.85
SEC61A2-201ENST00000298428 NFIL3Q16649 462 aa20.34■□□□□ 0.85
SEC61A2-201ENST00000298428 LENG1Q96BZ8 264 aaPredicted RBP20.34■□□□□ 0.85
SEC61A2-201ENST00000298428 HVCN1Q96D96 273 aa20.34■□□□□ 0.85
SEC61A2-201ENST00000298428 AGPAT3Q9NRZ7 376 aa20.34■□□□□ 0.85
SEC61A2-201ENST00000298428 DENND3A2RUS2 1198 aa20.33■□□□□ 0.85
SEC61A2-201ENST00000298428 GAS2O43903 313 aaKnown RBP20.33■□□□□ 0.85
SEC61A2-201ENST00000298428 PBX1P40424 430 aa20.33■□□□□ 0.85
SEC61A2-201ENST00000298428 GSDMDP57764 484 aa20.33■□□□□ 0.85
SEC61A2-201ENST00000298428 PPP2R5AQ15172 486 aa20.33■□□□□ 0.85
SEC61A2-201ENST00000298428 MFSD14CQ5VZR4 134 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms