RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ST6GALNAC4Q9H4F1 302 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 AGPAT3Q9NRZ7 376 aa15.65■□□□□ 0.1
C9orf3-202ENST00000297979 MYH9P35579 1960 aaKnown RBP15.65■□□□□ 0.1
C9orf3-202ENST00000297979 FARP2O94887 1054 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-202ENST00000297979 TUBB4AP04350 444 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 CCNA1P78396 465 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 XKR3Q5GH77 459 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 EEPD1Q7L9B9 569 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 ANKRD23Q86SG2 305 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 CCDC155Q8N6L0 562 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 PORCNQ9H237 461 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 TMEM206Q9H813 350 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 ZNF302Q9NR11 478 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 SOCS7O14512 581 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 XRCC5P13010 732 aaKnown RBP15.64■□□□□ 0.09
C9orf3-202ENST00000297979 MEA1Q16626 185 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 MKNK1Q9BUB5 465 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 EFCC1Q9HA90 598 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 CYP26B1Q9NR63 512 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 ZNHIT6Q9NWK9 470 aaKnown RBP15.64■□□□□ 0.09
C9orf3-202ENST00000297979 MAFBQ9Y5Q3 323 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-202ENST00000297979 ADGRG1Q9Y653 693 aa15.64■□□□□ 0.09
C9orf3-202ENST00000297979 ZNFX1Q9P2E3 1918 aaKnown RBP15.63■□□□□ 0.09
C9orf3-202ENST00000297979 LOC102724159A0A0B4J2E5 919 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 EPHB6O15197 1021 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 DGAT1O75907 488 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 CASP4P49662 377 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 NCKAP1LP55160 1127 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 PEX3P56589 373 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 KCNMA1Q12791 1236 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 KCNH2Q12809 1159 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 PWP2Q15269 919 aaKnown RBP15.63■□□□□ 0.09
C9orf3-202ENST00000297979 KCNV1Q6PIU1 500 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 NEK11Q8NG66 645 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 KIFAP3Q92845 792 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 ACCSQ96QU6 501 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 PAXBP1Q9Y5B6 917 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 ZBTB48P10074 688 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-202ENST00000297979 PSMC2P35998 433 aaKnown RBP15.63■□□□□ 0.09
C9orf3-202ENST00000297979 GTF2BQ00403 316 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 SPRYD7Q5W111 196 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 WDR59Q6PJI9 974 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 HAUS6Q7Z4H7 955 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 ANKRD13CQ8N6S4 541 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 MCPH1Q8NEM0 835 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 DMAC2Q9NW81 257 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 IGKV6D-21A0A0A0MT36 114 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 AFPP02771 609 aaKnown RBP15.63■□□□□ 0.09
C9orf3-202ENST00000297979 GCLCP48506 637 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-202ENST00000297979 DMP1Q13316 513 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-202ENST00000297979 METTL7BQ6UX53 244 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 FAM186BQ8IYM0 893 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 CHP1Q99653 195 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 EDEM3Q9BZQ6 932 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 C17orf75Q9HAS0 396 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 ATP6V0A4Q9HBG4 840 aa15.63■□□□□ 0.09
C9orf3-202ENST00000297979 SLC16A4O15374 487 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 GGPS1O95749 300 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 OATP04181 439 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 SMTNP53814 917 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 MYBPC2Q14324 1141 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 DCAF17Q5H9S7 520 aaPredicted RBP15.62■□□□□ 0.09
C9orf3-202ENST00000297979 SLC9A9Q8IVB4 645 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 KIF18AQ8NI77 898 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 MORC4Q8TE76 937 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 PLXNB2O15031 1838 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 GSTTP1A0A1W2PQM5 241 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 CYP2J2P51589 502 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 LY6KQ17RY6 165 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 BORCS6Q96GS4 357 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 LSM14BQ9BX40 385 aaKnown RBP15.62■□□□□ 0.09
C9orf3-202ENST00000297979 PDLIM7Q9NR12 457 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 CGNQ9P2M7 1197 aaKnown RBP15.62■□□□□ 0.09
C9orf3-202ENST00000297979 DDX41Q9UJV9 622 aaKnown RBP15.62■□□□□ 0.09
C9orf3-202ENST00000297979 FRMD4BQ9Y2L6 1034 aa15.62■□□□□ 0.09
C9orf3-202ENST00000297979 CCDC169A6NNP5 214 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 ATP4AP20648 1035 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 NPTX2P47972 431 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 ETF1P62495 437 aaKnown RBP15.61■□□□□ 0.09
C9orf3-202ENST00000297979 MTERF2Q49AM1 385 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 TCERG1LQ5VWI1 586 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 SLC35C1Q96A29 364 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 HVCN1Q96D96 273 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 MLXIPQ9HAP2 919 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 MORF4L1Q9UBU8 362 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 ASB14A6NK59 587 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 ARIH2O95376 493 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 HNRNPH3P31942 346 aaKnown RBP15.61■□□□□ 0.09
C9orf3-202ENST00000297979 RTP1P59025 263 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 CDK17Q00537 523 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 FAM160B1Q5W0V3 765 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 FBXO16Q8IX29 292 aaPredicted RBP15.61■□□□□ 0.09
C9orf3-202ENST00000297979 SPIRE2Q8WWL2 714 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 SEPT1Q8WYJ6 367 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 CRACR2AQ9BSW2 395 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 XPNPEP1Q9NQW7 623 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 CEP72Q9P209 647 aa15.61■□□□□ 0.09
C9orf3-202ENST00000297979 MCM3APO60318 1980 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 NBPF20Q3BBV1 942 aa15.6■□□□□ 0.09
C9orf3-202ENST00000297979 TRIM65Q6PJ69 517 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms