RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 CHEK2O96017 543 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 TBXAS1P24557 533 aaPredicted RBP7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 RGS2P41220 211 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 PAPOLAP51003 745 aaKnown RBP7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 NME3Q13232 169 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 CABS1Q96KC9 395 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 SPON2Q9BUD6 331 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 MTFR1LQ9H019 292 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 KLHL14Q9P2G3 628 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 DAGLAQ9Y4D2 1042 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 PFASO15067 1338 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 EFCAB8A8MWE9 144 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 TTI1O43156 1089 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 EFNA5P52803 228 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 ADCY1Q08828 1119 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 MXD4Q14582 209 aaPredicted RBP7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 TMEM270Q6UE05 265 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 SAMD7Q7Z3H4 446 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 RNF149Q8NC42 400 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 EXT2Q93063 718 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 SH3KBP1Q96B97 665 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 SPZ1Q9BXG8 430 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 RABEP2Q9H5N1 569 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 TJP2Q9UDY2 1190 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 LCMT1Q9UIC8 334 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 JRKLQ9Y4A0 524 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 EPHX2P34913 555 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 YWHAHQ04917 246 aaPredicted RBP7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 UNC13DQ70J99 1090 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 PCGF5Q86SE9 256 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 GPATCH11Q8N954 259 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 MARCH10Q8NA82 808 aaPredicted RBP7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 GDAP1L1Q96MZ0 367 aa7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 TSPYL2Q9H2G4 693 aaPredicted RBP7.42□□□□□ -1.22
GAPVD1-202ENST00000297933 ZC3H4Q9UPT8 1303 aaKnown RBP7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 SETD1BQ9UPS6 1966 aaKnown RBP7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 E9PMD0 336 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 EVI5O60447 810 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 PRKCBP05771 671 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 PCK1P35558 622 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 CACNB2Q08289 660 aaPredicted RBP7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 RBL2Q08999 1139 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 SNX17Q15036 470 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 PASD1Q8IV76 773 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 SRRM1Q8IYB3 904 aaKnown RBP7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 ENAHQ8N8S7 591 aaPredicted RBP7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 FAM151AQ8WW52 585 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 PBXIP1Q96AQ6 731 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 GLT1D1Q96MS3 346 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 RRAGCQ9HB90 399 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 ADARB2Q9NS39 739 aaKnown RBP7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 ERCC6L2Q5T890 1561 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 IKBKBO14920 756 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 CALB1P05937 261 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 ZNF445P59923 1031 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 BAATQ14032 418 aaPredicted RBP7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 CYB5R4Q7L1T6 521 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 KSR1Q8IVT5 923 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 TRIM42Q8IWZ5 723 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 EFHBQ8N7U6 833 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 CEP120Q8N960 986 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 FAF2Q96CS3 445 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 SPATA17Q96L03 361 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 DEFB129Q9H1M3 183 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 ADAM22Q9P0K1 906 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 IQSEC2Q5JU85 1478 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 POTEB3A0JP26 581 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 TMEM247A6NEH6 219 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 UBE2Q2LH0YL09 131 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 STXBP3O00186 592 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 SNX2O60749 519 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 ITGA4P13612 1032 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 ARL4DP49703 201 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 IRX4P78413 519 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 LLGL1Q15334 1064 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 ELF2Q15723 593 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 DGKDQ16760 1214 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 TTC19Q6DKK2 380 aaPredicted RBP7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 CDC42EP5Q6NZY7 148 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 POTEBQ6S5H4 581 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 TRIM67Q6ZTA4 783 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 POTEDQ86YR6 584 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 GPD1LQ8N335 351 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 RAB42Q8N4Z0 105 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 SNX19Q92543 992 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 VPS39Q96JC1 886 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 TNIP3Q96KP6 325 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 MXD3Q9BW11 206 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 TRPV6Q9H1D0 765 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 DCDC2CA8MYV0 355 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 NR3C1P04150 777 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 GCLMP48507 274 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 AP3M2P53677 418 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 EFHC2Q5JST6 749 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 GNASQ5JWF2 1037 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 HHIPL2Q6UWX4 724 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 LINC00301Q8NCQ3 95 aa7.41□□□□□ -1.22
GAPVD1-202ENST00000297933 AGBL3Q8NEM8 1001 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms