RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 PPP1R18Q6NYC8 613 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 POTEGQ6S5H5 508 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 POTEEQ6S8J3 1075 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 CRAMP1Q96RY5 1269 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 NOC2LQ9Y3T9 749 aaKnown RBP17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 GCLMP48507 274 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 ASPHQ12797 758 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 CENPUQ71F23 418 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 TRIM4Q9C037 500 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 NXF1Q9UBU9 619 aaKnown RBP17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 TRIM10Q9UDY6 481 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 CHRNA5P30532 468 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 SH3BGRP55822 239 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 THOC1Q96FV9 657 aaKnown RBP17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 ZNRF3Q9ULT6 936 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 SUGT1Q9Y2Z0 365 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 SPATA31A1Q5TZJ5 1347 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 MAPK13O15264 365 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 HPS3Q969F9 1004 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 VIPAS39Q9H9C1 493 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 SENP2Q9HC62 589 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 CEP152O94986 1710 aa17.21■□□□□ 0.35
ARHGEF28-201ENST00000296794 SRGNP10124 158 aa17.21■□□□□ 0.34
ARHGEF28-201ENST00000296794 KCTD6Q8NC69 237 aa17.21■□□□□ 0.34
ARHGEF28-201ENST00000296794 PYROXD1Q8WU10 500 aa17.21■□□□□ 0.34
ARHGEF28-201ENST00000296794 FAM149B1Q96BN6 582 aa17.21■□□□□ 0.34
ARHGEF28-201ENST00000296794 EDEM3Q9BZQ6 932 aa17.21■□□□□ 0.34
ARHGEF28-201ENST00000296794 SNX25Q9H3E2 840 aa17.21■□□□□ 0.34
ARHGEF28-201ENST00000296794 SETD1BQ9UPS6 1966 aaKnown RBP17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 FAM196BA6NMK8 535 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 HOXD10P28358 340 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 SNRNP48Q6IEG0 339 aaKnown RBP17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 FBXO41Q8TF61 875 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 HVCN1Q96D96 273 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 TUBB6Q9BUF5 446 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 CCSER1Q9C0I3 900 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 SAYSD1Q9NPB0 183 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 PPP1R9AQ9ULJ8 1098 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 ACTN1P12814 892 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 NFX1Q12986 1120 aaKnown RBP17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 DRAP1Q14919 205 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 NAALADL2Q58DX5 795 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 SRLQ86TD4 932 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 NOP53Q9NZM5 478 aaKnown RBP17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 HERC5Q9UII4 1024 aaKnown RBP17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 LMTK2Q8IWU2 1503 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 RCSD1Q6JBY9 416 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 FAM47EQ6ZV65 393 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 PDIK1LQ8N165 341 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 FAM84BQ96KN1 310 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 PLA2G12BQ9BX93 195 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 HEMGNQ9BXL5 484 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 IFT122Q9HBG6 1241 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 AGPAT5Q9NUQ2 364 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 FBXL5Q9UKA1 691 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 TYW5A2RUC4 315 aaKnown RBP17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 K7ERI5 159 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 GRIN3BO60391 1043 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 GUCY1A3Q02108 690 aa17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 NSUN6Q8TEA1 469 aaKnown RBP17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 SPATS2LQ9NUQ6 558 aaKnown RBP17.2■□□□□ 0.34
ARHGEF28-201ENST00000296794 DLC1Q96QB1 1528 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 FDX1P10109 184 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 ECE1P42892 770 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 AP1ARQ63HQ0 302 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 OTUD5Q96G74 571 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 FAM20AQ96MK3 541 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 GINM1Q9NU53 330 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 USH1CQ9Y6N9 552 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 SCINQ9Y6U3 715 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 ZNF233A6NK53 670 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 GYPCP04921 128 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 GNAT1P11488 350 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 STAT3P40763 770 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 RFX5P48382 616 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 XXYLT1Q8NBI6 393 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 GIMAP8Q8ND71 665 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 FAM49AQ9H0Q0 323 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 SLITRK6Q9H5Y7 841 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 RASA4BC9J798 803 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 RASA4O43374 803 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 SPARCL1Q14515 664 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 MARCH10Q8NA82 808 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 PRPF38AQ8NAV1 312 aaKnown RBP17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 VCX3AQ9NNX9 186 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 RNF146Q9NTX7 359 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 CPS1P31327 1500 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 ESRRAP11474 423 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 RAVER2Q9HCJ3 691 aaKnown RBP17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 SMYD2Q9NRG4 433 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 HPS5Q9UPZ3 1129 aa17.19■□□□□ 0.34
ARHGEF28-201ENST00000296794 SURF1Q15526 300 aa17.18■□□□□ 0.34
ARHGEF28-201ENST00000296794 NBPF9Q3BBW0 867 aa17.18■□□□□ 0.34
ARHGEF28-201ENST00000296794 ZBTB33Q86T24 672 aa17.18■□□□□ 0.34
ARHGEF28-201ENST00000296794 GLYCTKQ8IVS8 523 aa17.18■□□□□ 0.34
ARHGEF28-201ENST00000296794 SRRM1Q8IYB3 904 aaKnown RBP17.18■□□□□ 0.34
ARHGEF28-201ENST00000296794 FAM167AQ96KS9 214 aa17.18■□□□□ 0.34
ARHGEF28-201ENST00000296794 MLXIPLQ9NP71 852 aa17.18■□□□□ 0.34
ARHGEF28-201ENST00000296794 SKIP12755 728 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms